Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttc cgaaaccaaa ggttcagaaa
151   gtgaaaaagg gataggtgca gagactcaac ggaagctgtt ctaacaaatg
201   gagttggctg cattagtaga taaatctttc cgtctaaaat tccgaaagga
251   taaagtgaag gataaacgta tatatacgta ttgaatacta tatcaaatga
301   ttagtgacaa ctcgactgaa tctgtatttt ttatatgaaa acggaagaat
351   tggtgtgaat agattccaca ttgaagaaag aatcgaatat tcattgatca
401   aatgattcac tccatagtct gatagatctt ttcaagaatt tattaatcag
451   acgagaataa agatagagtc ccgttctaca tgtcaatgtc ggcaacaatg
501   aaatttatag taagaggaaa atccgtcgac tttaaaaatc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ680509.1 nt Wendlandia uvariifolia subsp. uvari... 1760 bp Wendlandia uvariifolia subsp. uvariifolia QL-PLN-00-007 566 bp View
KJ680512.1 nt Wendlandia uvariifolia subsp. chine... 1746 bp Wendlandia uvariifolia subsp. chinensis QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.