Amplicon details |
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Amplicon: |
571 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtacggaa 51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa 101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa 151 ggcaaaaaag ggataggtgc agagactcaa tggaagttgt tctaacaaat 201 ggagttgact tcgttggtag aggaatctct ccatcgaaac ttcagaaagg 251 gtgacgggta aacgtatcta ttgaatactc tatcaaaatc aaatgattaa 301 tggtgccccg aatccgtatc tgtatttttg atctaaaaag tggaaaattt 351 tgtgtgaatt tattccacca ttgaagaaag aattaactaa aatattcatt 401 catcaaatca ttcactccat agtctgatag atcttttaaa gatctgatta 451 attggacaag aataaagata gagtcccatt ctacatgtca ataccggcaa 501 caatgaaatt tatagtaaga ggaaaatccg tcgactttaa aaatcgtgag 551 ggttcaagtc cctctatccc c |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ296503.1 | nt | Cromidon decumbens chloroplast tRNA... | 1610 bp | Cromidon decumbens | QL-PLN-00-007 | 571 bp | View |
| AJ296493.1 | nt | Selago sp. Bremer 3732 chloroplast ... | 1753 bp | Selago sp. Bremer 3732 | QL-PLN-00-007 | 571 bp | View |
| AJ586051.1 | nt | Selago dolichonema chloroplast trnT... | 1652 bp | Selago dolichonema | QL-PLN-00-007 | 571 bp | View |
| AJ586054.1 | nt | Selago geniculata chloroplast trnT-... | 1732 bp | Selago geniculata | QL-PLN-00-007 | 571 bp | View |
| AJ586064.1 | nt | Selago parvibractea chloroplast trn... | 1737 bp | Selago parvibractea | QL-PLN-00-007 | 571 bp | View |
| AJ586065.1 | nt | Selago setulosa chloroplast trnT-tr... | 1732 bp | Selago setulosa | QL-PLN-00-007 | 571 bp | View |
| AJ586075.1 | nt | Selago spectabilis chloroplast trnT... | 1735 bp | Selago spectabilis | QL-PLN-00-007 | 571 bp | View |
| AJ586079.1 | nt | Microdon dubius chloroplast trnT-tr... | 1731 bp | Microdon dubius | QL-PLN-00-007 | 571 bp | View |
| AJ296491.1 | nt | Agathelpis angustifolia chloroplast... | 1719 bp | Agathelpis angustifolia | QL-PLN-00-007 | 571 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.