Amplicon details |
||
Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
||
| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MF431181.1 | nt | Saccharum sinense isolate UbaIndia ... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431182.1 | nt | Saccharum sinense isolate UbaNaquin... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431183.1 | nt | Saccharum sinense isolate ChukChe t... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| LS974680.1 | nt | Miscanthus capensis genome assembly... | 141213 bp | Miscanthus capensis | QL-PLN-00-007 | 526 bp | View |
| LS974681.1 | nt | Saccharum spontaneum genome assembl... | 141407 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| LS974682.1 | nt | Miscanthus capensis genome assembly... | 140484 bp | Miscanthus capensis | QL-PLN-00-007 | 526 bp | View |
| LS975126.1 | nt | Saccharum spontaneum genome assembl... | 141206 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| LS975128.1 | nt | Saccharum spontaneum genome assembl... | 141280 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| LS975129.1 | nt | Saccharum hybrid cultivar genome as... | 141095 bp | Saccharum hybrid cultivar | QL-PLN-00-007 | 526 bp | View |
| LS975130.1 | nt | Saccharum spontaneum genome assembl... | 141371 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| LS975131.1 | nt | Saccharum spontaneum genome assembl... | 141348 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| LS975132.1 | nt | Saccharum hybrid cultivar genome as... | 141181 bp | Saccharum hybrid cultivar SP70-1143 | QL-PLN-00-007 | 526 bp | View |
| LS975136.1 | nt | Saccharum spontaneum genome assembl... | 141153 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| BK010677.1 | nt | TPA: Saccharum hybrid cultivar B436... | 141172 bp | Saccharum hybrid cultivar B4362 | QL-PLN-00-007 | 526 bp | View |
| MF431133.1 | nt | Saccharum robustum isolate IN84_076... | 526 bp | Saccharum robustum | QL-PLN-00-007 | 526 bp | View |
| MF431142.1 | nt | Saccharum sinense isolate Mcikum tR... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431151.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431160.1 | nt | Saccharum officinarum isolate OiDen... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431169.1 | nt | Saccharum spontaneum isolate SES114... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431178.1 | nt | Saccharum barberi isolate Tereru tR... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.