Amplicon details |
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Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MF431158.1 | nt | Saccharum officinarum isolate NG77_... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431159.1 | nt | Saccharum robustum isolate NH70_015... | 526 bp | Saccharum robustum | QL-PLN-00-007 | 526 bp | View |
| MF431161.1 | nt | Saccharum spontaneum isolate PCANOR... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431162.1 | nt | Saccharum barberi isolate Rena tRNA... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431163.1 | nt | Saccharum barberi isolate Ruckri tR... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431164.1 | nt | Saccharum spontaneum isolate S001 t... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431165.1 | nt | Saccharum spontaneum isolate S66_12... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431166.1 | nt | Saccharum officinarum isolate Saipa... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431167.1 | nt | Saccharum spontaneum isolate SaudiA... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431168.1 | nt | Saccharum barberi isolate Semari tR... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431170.1 | nt | Saccharum spontaneum isolate SES189... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431171.1 | nt | Saccharum spontaneum isolate SES323... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431172.1 | nt | Saccharum spontaneum isolate SM7916... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431173.1 | nt | Saccharum spontaneum isolate SSpont... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431174.1 | nt | Saccharum barberi isolate Sunnabile... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431175.1 | nt | Saccharum sinense isolate TanzhonBa... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431176.1 | nt | Saccharum robustum isolate TeboeSal... | 526 bp | Saccharum robustum | QL-PLN-00-007 | 526 bp | View |
| MF431177.1 | nt | Saccharum sinense isolate TekchaOki... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431179.1 | nt | Saccharum sinense isolate Tukuyu1 t... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431180.1 | nt | Saccharum sinense isolate UbaDelNat... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.