Amplicon details |
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Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MF431136.1 | nt | Saccharum spontaneum isolate IND81_... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431137.1 | nt | Saccharum spontaneum isolate IND82_... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431138.1 | nt | Saccharum barberi isolate Kalari tR... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431139.1 | nt | Saccharum barberi isolate Katha tRN... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431140.1 | nt | Saccharum barberi isolate Khagzi tR... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431141.1 | nt | Saccharum officinarum isolate LaPur... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431143.1 | nt | Saccharum officinarum isolate Mento... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431144.1 | nt | Saccharum sinense isolate Merthi tR... | 526 bp | Saccharum sinense | QL-PLN-00-007 | 526 bp | View |
| MF431145.1 | nt | Saccharum spontaneum isolate MOL103... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431146.1 | nt | Saccharum robustum isolate Molokai5... | 526 bp | Saccharum robustum | QL-PLN-00-007 | 526 bp | View |
| MF431147.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431148.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431149.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431150.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431152.1 | nt | Saccharum spontaneum isolate MPTH97... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431153.1 | nt | Saccharum spontaneum isolate MPTH98... | 526 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MF431154.1 | nt | Saccharum officinarum isolate Munto... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431155.1 | nt | Saccharum barberi isolate Nargori t... | 526 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| MF431156.1 | nt | Saccharum officinarum isolate NG21_... | 526 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
| MF431157.1 | nt | Saccharum edule isolate NG77_010 tR... | 526 bp | Saccharum edule | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.