European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 607 bp 
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc ttgattttga gaaaaagggt ttaatttata
151   gtttttataa tataaaacta caataaaaaa agataggtgc agagactcaa
201   tggaagctgt tctaacgaat gaagttgatt acgttgcgct ggtagccgga
251   atccttctat caaaattacg gagaggatgc tcgccctata tacgtatata
301   tacatactga catagtaaac gattgattaa tcgcggcccg aatccattat
351   aatatatata tatgaaaaat ttaagagtta ttgtaaatct attccatatt
401   ccaatcaaag tttaaggaag aatcgactat tcagtgatca aattattcat
451   tccagagtct gtatagatct ttttaaaaac tgattattcg gacgagaata
501   aagagagagt cccattctac gtgtcaatac cgacaacaat gaaatttata
551   gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt caagtccctc
601   tatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN810975.1 nt Fritillaria monantha chloroplast, c... 152182 bp Fritillaria monantha QL-PLN-00-007 607 bp View
MN810976.1 nt Fritillaria monantha chloroplast, c... 152182 bp Fritillaria monantha QL-PLN-00-007 607 bp View
MN810977.1 nt Fritillaria anhuiensis chloroplast,... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MN810978.1 nt Fritillaria anhuiensis chloroplast,... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MN810979.1 nt Fritillaria anhuiensis chloroplast,... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MN810981.1 nt Fritillaria anhuiensis chloroplast,... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MH244914.1 nt Fritillaria thunbergii chloroplast,... 152160 bp Fritillaria thunbergii QL-PLN-00-007 607 bp View
MH593360.1 nt Fritillaria thunbergii isolate GZDQ... 152160 bp Fritillaria thunbergii QL-PLN-00-007 607 bp View
MH593362.1 nt Fritillaria thunbergii isolate GZDQ... 152160 bp Fritillaria thunbergii QL-PLN-00-007 607 bp View
MH593363.1 nt Fritillaria anhuiensis isolate GZDQ... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MT261156.1 nt Fritillaria usuriensis plastid, com... 152156 bp Fritillaria usuriensis QL-PLN-00-007 607 bp View
MN810980.1 nt Fritillaria anhuiensis chloroplast,... 152119 bp Fritillaria anhuiensis QL-PLN-00-007 607 bp View
MH593361.1 nt Fritillaria thunbergii isolate GZDQ... 152160 bp Fritillaria thunbergii QL-PLN-00-007 607 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.