Amplicon details

Amplicon:

617 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaacaagtg gttctcaaac
151   tagaacccaa aggaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacgaatcga agtaattgcg ttgtgttggt agtggaacct cttcgaaatt
251   agagaaagaa gggctttata catctaatat acacgcatat atactgacat
301   agcaaacgat taatcacgga acccatatca taatataggt tccttatttt
351   attttttgaa tgaaattagg aatgattatg aaatagaaaa ttctgaattt
401   ttttagaatt attgtgaatc cattccaatc gaatattgag taatcaaatc
451   cttcaattca ttattttgtt ttcgagatct taaaaaaagt ggattaatcg
501   gacgaggata aagagagagt cccattctac atgtcaatac tgacaacaat
551   gaaatttcta gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt
601   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR689487.1 nt Paspalum dilatatum tRNA-Leu (trnL) ... 617 bp Paspalum dilatatum QL-PLN-00-007 617 bp View
MT094443.1 nt Paspalum millegrana voucher W. Dunn... 144079 bp Paspalum millegrana QL-PLN-00-007 617 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.