Amplicon details

Amplicon:

123 bp
1     acacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
M10376.1 nt Cauliflower mosaic virus (altered v... 8016 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863149.1 nt Cauliflower mosaic virus DNA, compl... 8013 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863147.1 nt Cauliflower mosaic virus DNA, compl... 8012 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863143.1 nt Cauliflower mosaic virus DNA, compl... 8014 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863156.1 nt Cauliflower mosaic virus DNA, compl... 8013 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863146.1 nt Cauliflower mosaic virus DNA, compl... 8013 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863148.1 nt Cauliflower mosaic virus DNA, compl... 8014 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863153.1 nt Cauliflower mosaic virus DNA, compl... 8012 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
KF498706.1 nt Cauliflower mosaic virus isolate CB... 8017 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
KF550287.1 nt Cauliflower mosaic virus isolate Tr... 8020 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
KY703615.1 nt Cauliflower mosaic virus strain DSM... 8010 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View
AB863144.1 nt Cauliflower mosaic virus DNA, compl... 8008 bp Cauliflower mosaic virus QL-ELE-00-004 123 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.