Amplicon details

Amplicon:

594 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatttaaaat
101   gggcaatcct gagccaaatc cttattttga gaaaacaaag gtttataaaa
151   ctagaattta aaaggatagg tgcagagact caatggaagc tgttctaacg
201   aatggagttg actacgtttt gttggtagca ggaatccgtc tataaaaatt
251   acagaaaaga tggtcctata tacctaatac gtatgtatac atactgccat
301   atcaaacgat taatcatgac ccgaatctat tatattataa ttatatataa
351   ttataatatg aaaaattcag agttattatg aatccatttc aatggaagtt
401   gaaggaagaa tcgaatattc aattatgaaa tcattcattc cagagtttga
451   tagatctttt gaaaaactga ttaatcggac gagaataaag agagagtccc
501   attctacatg tcaataccga caacaatgaa atttatagta agaggaaaat
551   ccgtcgactt ttaaaatcgt gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC609778.1 nt Musa velutina chloroplast DNA, comp... 170061 bp Musa velutina QL-PLN-00-007 594 bp View
MF101230.1 nt Musa velutina isolate SS&JS 168 Run... 990 bp Musa velutina QL-PLN-00-007 594 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.