Amplicon details |
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Amplicon: |
525 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa 151 ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg aagtaataac gattaatcac agaacccata ttataatata 251 ggttctttat tttattttta gaatgaaatt aggaaggatt atgaaataga 301 aaattcataa tttttttaga attattgtga atctattcca atcgaatatt 351 gagtaatcaa atccttcaat tcattgtttt cgagatcttt taaaaagtgg 401 attaatcgga cgaggataaa gagagagtcc cattctacat gtcaatactg 451 acaacaatga aatttctagt aaaaggaaaa tccgtcgact ttataagtcg 501 tgagggttca agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MH181228.1 | nt | Schizachyrium claudopus isolate TK7... | 139385 bp | Schizachyrium claudopus | QL-PLN-00-007 | 525 bp | View |
| MT942631.1 | nt | Andropogon hallii chloroplast, part... | 134274 bp | Andropogon hallii | QL-PLN-00-007 | 525 bp | View |
| MF170217.1 | nt | Schizachyrium scoparium chloroplast... | 139296 bp | Schizachyrium scoparium | QL-PLN-00-007 | 525 bp | View |
| MG709459.1 | nt | Schizachyrium scoparium voucher KL7... | 525 bp | Schizachyrium scoparium | QL-PLN-00-007 | 525 bp | View |
| MH181165.1 | nt | Andropogon gerardi isolate CAM807 c... | 134222 bp | Andropogon gerardi | QL-PLN-00-007 | 525 bp | View |
| MH181186.1 | nt | Andropogon heterantherus isolate TK... | 139205 bp | Andropogon heterantherus | QL-PLN-00-007 | 525 bp | View |
| MH181207.1 | nt | Schizachyrium spicatum isolate TK69... | 139291 bp | Schizachyrium spicatum | QL-PLN-00-007 | 525 bp | View |
| MH181219.1 | nt | Schizachyrium exile isolate TK700 c... | 138540 bp | Schizachyrium exile | QL-PLN-00-007 | 525 bp | View |
| MH181222.1 | nt | Andropogon gerardii isolate TK417 c... | 134148 bp | Andropogon gerardi | QL-PLN-00-007 | 525 bp | View |
| MH181227.1 | nt | Schizachyrium djalonicum isolate TK... | 138422 bp | Schizachyrium djalonicum | QL-PLN-00-007 | 525 bp | View |
| MH181233.1 | nt | Schizachyrium microstachyum isolate... | 139249 bp | Schizachyrium microstachyum | QL-PLN-00-007 | 525 bp | View |
| MH181234.1 | nt | Schizachyrium microstachyum isolate... | 139263 bp | Schizachyrium microstachyum | QL-PLN-00-007 | 525 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.