Amplicon details

Amplicon:

525 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaataac gattaatcac agaacctata ttataatata
251   ggttctttat ttgattttta gaatgaaatt aggaaggatt atgaaataga
301   aaattcataa tttttttaga attattgtga atctattcca atcgaatatt
351   gagtaatcaa atccttcaat tcattgtttt cgagatcttt taaaaagtgg
401   attaatcgga cgaggataaa gagagagtcc cattctacat gtcaatactg
451   acaacaatga aatttctagt aaaaggaaaa tccgtcgact ttataagtcg
501   tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT610044.1 nt Elymandra grallata isolate TK254 ch... 139871 bp Elymandra grallata QL-PLN-00-007 525 bp View
MT610074.1 nt Monocymbium ceresiiforme isolate TK... 138471 bp Monocymbium ceresiiforme QL-PLN-00-007 525 bp View
MH181166.1 nt Elymandra androphila isolate TK592 ... 139731 bp Elymandra androphila QL-PLN-00-007 525 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.