Amplicon details

Amplicon:

529 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctttttt ctcaaaaaaa aggataggtg
151   cagagactca atggaagttg ttctaacaaa tggagtggac tgcgccggta
201   gaggaatctt tccacggaaa ctttagaaag gatgaaggat aaacccatct
251   attgaatact atatcaaatg attaatgttg gcccgaatct gtttttttaa
301   tatgaaaatg gaaaaatcga tgtgaattta tttcacgttg aagaataaat
351   cgaatattca tcaactcatt cactccatag ttcgatagat cttttaaaga
401   acttattaat cggacgagaa taaagataga gtcccattct acatgtcaat
451   accggcaaca atgaaattta tagtaagagg aaaatccgtc gactttaaaa
501   atcgtgaggg ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN062352.1 nt Salvia plebeia plastid, complete ge... 151081 bp Salvia plebeia QL-PLN-00-007 529 bp View
KC414300.1 nt Salvia plebeia isolate 511190034 tR... 888 bp Salvia plebeia QL-PLN-00-007 529 bp View
MW752202.1 nt Salvia plebeia voucher GX Hu 0328 c... 151074 bp Salvia plebeia QL-PLN-00-007 529 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.