Amplicon details

Amplicon:

569 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggtaat cctgagccaa atcccgtttt ctcaaaacaa aggtaaaggt
151   tcaaaaaacg aaaaaaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacaaatg gagttgactg ccctgataga ggcatctttg catggaaact
251   tccgaaagga tgaaggataa atgtatctat tgaatactat atcaaatgat
301   taatgatggt ccgaatctgt atttgtattt tttaatatga aaaatggaag
351   aattggtgtg aattgattcc acattgaaga aaaaatcgaa tattcagtca
401   gcaaatgatt cactccatag tccgatagat cttttaaaga actgattaat
451   cggacgagaa taaagataga gtcccattct acatgtcaat accggcaaca
501   atgaaattta tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg
551   ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JX047798.1 nt Prostanthera howelliae voucher Wils... 1467 bp Prostanthera howelliae QL-PLN-00-007 569 bp View
JX047821.1 nt Prostanthera rhombea voucher Wilson... 1460 bp Prostanthera rhombea QL-PLN-00-007 569 bp View
JX047832.1 nt Prostanthera tallowa voucher Conn 5... 1468 bp Prostanthera tallowa QL-PLN-00-007 569 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.