Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggtaat cctgagccaa atcccgtttt atcaaaagaa aggtaaaggt
151   ttaaaaaacg aaaaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacaaatgga gttgactgcc ctggtagagg catctttgca tggaaacttc
251   cgaaaggatg aaggataaat gtatctattg aatactatat caaatgatta
301   atgatggtcc gaatctgtat ttgtattttt taatatgaaa aatggaagaa
351   ttggtgtgaa ttgattccac attgaagaaa aaatcaaata ttcagtcagc
401   aaatgattca ctccatagtc caatagatct tttaaagaac tgattaatag
451   gacgagaata aagatagagt cccattctac atgtcaatac cggcaacaat
501   gaaatttata gtaataggaa aatccgtcga ctttaaaaat cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JX047774.1 nt Prostanthera askania voucher Anon. ... 1484 bp Prostanthera askania QL-PLN-00-007 567 bp View
JX047839.1 nt Prostanthera violacea voucher AD 87... 1484 bp Prostanthera violacea QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.