JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

607 bp

1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc ttgattttga gaaaaagggt ttaatttata
151   gtttttataa tataaaacta caataaaaaa agataggtgc agagactcaa
201   tggaagctgt tctaacgaat gaagttgatt acgttgcgct ggtagccgga
251   atccttctat caaaattacg gagaggatgc ccgccctata tacgtatata
301   tacatactga catagtaaac gattgattaa tcgcggcccg aatccattat
351   aatatatata tatgaaaaat ttaagagtta ttgtaaatct attccatatt
401   ccaatcaaag tttaaggaag aatcgaatat tcagtgatca aattattcat
451   tccagagtct gtatagatct ttttaaaaac tgattattcg gacgagaata
501   aagagagagt cccattctac gtgtcaatac cgacaacaat gaaatttata
551   gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt caagtccctc
601   tatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
MH593358.1	nt	Fritillaria taipaiensis isolate GZD...	151741 bp	Fritillaria taipaiensis	QL-PLN-00-007	607 bp	View
MH593359.1	nt	Fritillaria taipaiensis isolate GZD...	151741 bp	Fritillaria taipaiensis	QL-PLN-00-007	607 bp	View
KY646167.1	nt	Fritillaria cirrhosa chloroplast, c...	151083 bp	Fritillaria cirrhosa	QL-PLN-00-007	607 bp	View
MT806747.1	nt	Fritillaria przewalskii isolate ZDQ...	152067 bp	Fritillaria przewalskii	QL-PLN-00-007	607 bp	View
MT806755.1	nt	Fritillaria cirrhosa isolate ZDQ180...	151540 bp	Fritillaria cirrhosa	QL-PLN-00-007	607 bp	View
MN810972.1	nt	Fritillaria dajinensis chloroplast,...	152035 bp	Fritillaria dajinensis	QL-PLN-00-007	607 bp	View
MH593345.1	nt	Fritillaria cirrhosa isolate GZDQ3-...	152035 bp	Fritillaria cirrhosa	QL-PLN-00-007	607 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.