European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 607 bp 
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc ttgattttga gaaaaagggt ttaatttata
151   gtttttataa tataaaacta caataaaaaa agataggtgc agagactcaa
201   tggaagctgt tctaacgaat gaagttgatt acgttgcgct ggtagccgga
251   atccttctat caaaattacg gagaggatgc ccgccctata tacgtatata
301   tacatactga catagtaaac gattgattaa tcgcggcccg aatccattat
351   aatatatata tatgaaaaat ttaagagtta ttgtaaatct attccatatt
401   ccaatcaaag tttaaggaag aatcgaatat tcagtgatca aattattcat
451   tccagagtct gtatagatct ttttaaaaac tgattattcg gacgagaata
501   aagagagagt cccattctac gtgtcaatac cgacaacaat gaaatttata
551   gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt caagtccctc
601   tatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OM807061.1 nt Fritillaria unibracteata var. longi... 151075 bp Fritillaria unibracteata var. longinectarea QL-PLN-00-007 607 bp View
MN480806.1 nt Fritillaria delavayi chloroplast, c... 151938 bp Fritillaria delavayi QL-PLN-00-007 607 bp View
MT806748.1 nt Fritillaria sichuanica isolate ZDQ1... 152032 bp Fritillaria sichuanica QL-PLN-00-007 607 bp View
MN810971.1 nt Fritillaria sinica chloroplast, com... 152065 bp Fritillaria sinica QL-PLN-00-007 607 bp View
MN810973.1 nt Fritillaria dajinensis chloroplast,... 151991 bp Fritillaria dajinensis QL-PLN-00-007 607 bp View
OM807062.1 nt Fritillaria unibracteata var. macul... 151076 bp Fritillaria unibracteata var. maculata QL-PLN-00-007 607 bp View
OM807063.1 nt Fritillaria unibracteata chloroplas... 151066 bp Fritillaria unibracteata QL-PLN-00-007 607 bp View
KF769142.1 nt Fritillaria unibracteata var. wabue... 151009 bp Fritillaria unibracteata var. wabuensis QL-PLN-00-007 607 bp View
MK258141.1 nt Fritillaria sichuanica plastid, com... 151967 bp Fritillaria sichuanica QL-PLN-00-007 607 bp View
MK258146.1 nt Fritillaria dajinensis plastid, com... 151971 bp Fritillaria dajinensis QL-PLN-00-007 607 bp View
MH593342.1 nt Fritillaria cirrhosa isolate GZDQ1-... 151546 bp Fritillaria cirrhosa QL-PLN-00-007 607 bp View
MH593343.1 nt Fritillaria cirrhosa isolate GZDQ1-... 151546 bp Fritillaria cirrhosa QL-PLN-00-007 607 bp View
MH593344.1 nt Fritillaria cirrhosa isolate GZDQ2-... 151605 bp Fritillaria cirrhosa QL-PLN-00-007 607 bp View
MH593346.1 nt Fritillaria cirrhosa isolate GZDQ3-... 152035 bp Fritillaria cirrhosa QL-PLN-00-007 607 bp View
MH593347.1 nt Fritillaria przewalskii isolate GZD... 152054 bp Fritillaria przewalskii QL-PLN-00-007 607 bp View
MH593348.1 nt Fritillaria przewalskii isolate GZD... 151955 bp Fritillaria przewalskii QL-PLN-00-007 607 bp View
MH593349.1 nt Fritillaria przewalskii isolate GZD... 151960 bp Fritillaria przewalskii QL-PLN-00-007 607 bp View
MH593350.1 nt Fritillaria unibracteata isolate GZ... 151057 bp Fritillaria unibracteata QL-PLN-00-007 607 bp View
MH593351.1 nt Fritillaria unibracteata isolate GZ... 151012 bp Fritillaria unibracteata QL-PLN-00-007 607 bp View
MH593357.1 nt Fritillaria taipaiensis isolate GZD... 151741 bp Fritillaria taipaiensis QL-PLN-00-007 607 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.