JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

526 bp

1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc cacttttttg aaaaaacaag tggttctcaa
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat
251   aggttcttta ttttattttg agaatgaaat taggaatgat tatgaaatag
301   aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat
351   tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg
401   gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact
451   gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc
501   gtgagggttc aagtccctct atcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
LS975134.1	nt	Miscanthus sacchariflorus genome as...	141425 bp	Miscanthus sacchariflorus	QL-PLN-00-007	526 bp	View
LN869218.1	nt	Miscanthus sacchariflorus complete ...	141361 bp	Miscanthus sacchariflorus	QL-PLN-00-007	526 bp	View
LN869219.1	nt	Miscanthus sacchariflorus complete ...	141361 bp	Miscanthus sacchariflorus	QL-PLN-00-007	526 bp	View
BK010674.1	nt	TPA: Miscanthus sacchariflorus chlo...	141361 bp	Miscanthus sacchariflorus	QL-PLN-00-007	526 bp	View
LN869217.1	nt	Miscanthus sacchariflorus complete ...	141361 bp	Miscanthus sacchariflorus	QL-PLN-00-007	526 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.