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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 556 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa
151   aacgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcgttgg tagaggaatc tttccatgga aacttcagaa
251   aggatgaagg ataaacgtat ctattgaata ctatatcaaa tgattaatga
301   tggcctgaat ctgtattttt taatatgaaa agtggaagaa ttggtgtgaa
351   ttgatccaca ttgaagaaaa aatcgaatat tcattcatca aatcattcac
401   tccacagtcc gatagatctt ttaaagaact gattaatcgg acgagaataa
451   agatagagtc ccattctaca tgtcaatacc ggcaacaatg aaatttatag
501   taagaggaaa atccgtcgac tttaaaaatc gtgagggttc aagtccctct
551   atcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HF567871.1 nt Tectona grandis complete chloroplas... 153943 bp Tectona grandis QL-PLN-00-007 556 bp View
MN814870.1 nt Tectona grandis chloroplast, comple... 153953 bp Tectona grandis QL-PLN-00-007 556 bp View
HF567870.1 nt Tectona grandis complete chloroplas... 153943 bp Tectona grandis QL-PLN-00-007 556 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.