European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 571 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgatcacttt caaattcaga gaaaccctgg aattaacaaa
101   aatgggcaat cctgagccaa atcctgtttt ctgaaaacaa acaaaggttc
151   agaaaaaaag gataggtgca gagactcaat ggaagctatt ctaacaaatg
201   gagttaaatg cgttggtaga ggaatcttta catcgaaact tcagaaagaa
251   aaagaatgaa gtgaaggata aacgtatata catacgtatt gaatactcta
301   tcaaatgatt aatgacgacc cgaatccgta ttttttctat aaaaaataga
351   agaattggtg tgaatcgatt ctacattgaa gaaagaatcg aatattcatt
401   gatcaaatca ttcactccat agtctgatag atcttttgaa gaactgatta
451   atcggacgag aataaagata gagtcccgtt ctacatgtca ataccggcaa
501   caatgaaatt tatagtaaga ggaaaatccg tcgactttaa aaatcgtgag
551   ggttcaagtc cctctatccc c

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OM804186.1 nt Lycium barbarum clone V12L0053 Ning... 1089 bp Lycium barbarum QL-PLN-00-007 571 bp View
OM804249.1 nt Lycium sp. clone V12L0148 16-22-8-9... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
MN916546.1 nt Lycium barbarum clone V12L0001 Ning... 1089 bp Lycium barbarum QL-PLN-00-007 571 bp View
MN916555.1 nt Lycium barbarum clone V12L0030 Ning... 1089 bp Lycium barbarum QL-PLN-00-007 571 bp View
MN916574.1 nt Lycium yunnanense clone V12L0040 AN... 1128 bp Lycium yunnanense QL-PLN-00-007 571 bp View
MN916575.1 nt Lycium hybrid cultivar clone V12L00... 1128 bp Lycium hybrid cultivar QL-PLN-00-007 571 bp View
OK323214.1 nt Lycium barbarum chloroplast, comple... 155656 bp Lycium barbarum QL-PLN-00-007 571 bp View
OM804191.1 nt Lycium sp. clone V12L0137 09-191 tR... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804193.1 nt Lycium sp. clone V12L0139 Z63 tRNA-... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804199.1 nt Lycium barbarum clone V12L0056 Qixi... 1089 bp Lycium barbarum QL-PLN-00-007 571 bp View
OM804201.1 nt Lycium sp. clone V12L0142 16-19-8-1... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804203.1 nt Lycium sp. clone V12L0144 16-16-9-1... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804214.1 nt Lycium sp. clone V12L0116 M1 tRNA-L... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804217.1 nt Lycium sp. clone V12L0124 He12 tRNA... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804233.1 nt Lycium sp. clone V12L0134 Qin No.2 ... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804247.1 nt Lycium sp. clone V12L0152 5haohuang... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804250.1 nt Lycium sp. clone V12L0150 16-23-7-8... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OP866962.1 nt Lycium ruthenicum chloroplast, comp... 155655 bp Lycium ruthenicum QL-PLN-00-007 571 bp View
OL891645.1 nt Lycium chinense chloroplast, comple... 155713 bp Lycium chinense QL-PLN-00-007 571 bp View
MK040922.1 nt Lycium chinense plastid, complete g... 155756 bp Lycium chinense QL-PLN-00-007 571 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.