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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagtcgttc caaccacgac ttcaaagcaa gtggattgat
151   gtgacatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT896402.1 nt Cloning vector pG20_mCherry_Hyg, co... 6229 bp Cloning vector pG20_mCherry_Hyg QL-ELE-00-001 195 bp View
MT896403.1 nt Cloning vector pG20_mCherry_Blp, co... 5755 bp Cloning vector pG20_mCherry_Blp QL-ELE-00-001 195 bp View
MT896405.1 nt Cloning vector pG20_mVenus_Blp, com... 5764 bp Cloning vector pG20_mVenus_Blp QL-ELE-00-001 195 bp View
MT896407.1 nt Cloning vector pG20_GUS_Blp, comple... 6856 bp Cloning vector pG20_GUS_Blp QL-ELE-00-001 195 bp View
MT896408.1 nt Cloning vector pG20_LUC2_Hyg, compl... 7171 bp Cloning vector pG20_LUC2_Hyg QL-ELE-00-001 195 bp View
MT896409.1 nt Cloning vector pG20_LUC2_Blp, compl... 6697 bp Cloning vector pG20_LUC2_Blp QL-ELE-00-001 195 bp View
MT896410.1 nt Cloning vector pG20_MCS_Hyg, comple... 5476 bp Cloning vector pG20_MCS_Hyg QL-ELE-00-001 195 bp View
MT896411.1 nt Cloning vector pG20_MCS_blp, comple... 5002 bp Cloning vector pG20_MCS_blp QL-ELE-00-001 195 bp View
MT896412.1 nt Cloning vector pG20_6xHis_Hyg, comp... 5539 bp Cloning vector pG20_6xHis_Hyg QL-ELE-00-001 195 bp View
MT896413.1 nt Cloning vector pG20_6xHis_Blp, comp... 5065 bp Cloning vector pG20_6xHis_Blp QL-ELE-00-001 195 bp View
MT896414.1 nt Cloning vector pG20_FLAG_Hyg, compl... 5545 bp Cloning vector pG20_FLAG_Hyg QL-ELE-00-001 195 bp View
MT896415.1 nt Cloning vector pG20_FLAG_Blp, compl... 5071 bp Cloning vector pG20_FLAG_Blp QL-ELE-00-001 195 bp View
MT896416.1 nt Cloning vector pG20_Myc_Hyg, comple... 5551 bp Cloning vector pG20_Myc_Hyg QL-ELE-00-001 195 bp View
MT896417.1 nt Cloning vector pG20_Myc_Blp, comple... 5077 bp Cloning vector pG20_Myc_Blp QL-ELE-00-001 195 bp View
MT896404.1 nt Cloning vector pG20_mVenus_Hyg, com... 6238 bp Cloning vector pG20_mVenus_Hyg QL-ELE-00-001 195 bp View
MT896406.1 nt Cloning vector pG20_GUS_Hyg, comple... 7330 bp Cloning vector pG20_GUS_Hyg QL-ELE-00-001 195 bp View
MT896415.1 nt Cloning vector pG20_FLAG_Blp, compl... 5071 bp Cloning vector pG20_FLAG_Blp QL-ELE-00-005 195 bp View
MT896402.1 nt Cloning vector pG20_mCherry_Hyg, co... 6229 bp Cloning vector pG20_mCherry_Hyg QL-ELE-00-005 195 bp View
MT896411.1 nt Cloning vector pG20_MCS_blp, comple... 5002 bp Cloning vector pG20_MCS_blp QL-ELE-00-005 195 bp View
MT896403.1 nt Cloning vector pG20_mCherry_Blp, co... 5755 bp Cloning vector pG20_mCherry_Blp QL-ELE-00-005 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.