Amplicon details

Amplicon:

618 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag
301   atagcaaacg attaatcaca gagcccatat tataatattg gttctttatt
351   cttttttaga atgaaattag aaatagaaat gattatgaaa tcaaaaattc
401   ataatttttt tagaattatt gtgaatccat tccaatcgaa tatttagtaa
451   tcaaatcctt cagttcaaag ttttgaggtc tttaaaaaag tggattaatc
501   ggacgaggac aaagagagag tcccattcta catgtcaata ctgacaacaa
551   tgaaatttct agtaaaagga aaatccgtcg actttataag tcgtgagggt
601   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JF904789.1 nt Poa occidentalis voucher Soreng 403... 1821 bp Poa occidentalis QL-PLN-00-007 618 bp View
KU763514.2 nt Poa occidentalis voucher Peterson e... 1805 bp Poa occidentalis QL-PLN-00-007 618 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.