Amplicon details

Amplicon:

616 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   ttcgaaaaag aagggcttta tacatctaat aaacacgtat cgatactgac
301   atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt
351   cttttttaga atgaaataga aatgattatg aaataaaaaa ttctgaattt
401   ttttagaatt attgtattgt gaatccattc caatcgaata tttagtaatc
451   aaatccttca attcaaagtt ttgaggtctt taaaaaagtg gattaatcgg
501   acgaggacaa agagagagtc ccattctaca tgtcaatact gacaacaatg
551   aaatttctag taaaaggaaa atccgtcgac tttataagtc gtgagggttc
601   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW274728.1 nt Poa chapmaniana voucher US:Soreng 7... 1816 bp Poa chapmaniana QL-PLN-00-007 616 bp View
JF904760.1 nt Poa chapmaniana voucher Radford 447... 1441 bp Poa chapmaniana QL-PLN-00-007 616 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.