Amplicon details

Amplicon:

176 bp
1     ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51    tctggatctg atcaagagac aggatgagga tcgtttcgca tgattgaaca
101   agatggattg cacgcaggtt ctccggccgc ttgggtggag aggctattcg
151   gctatgactg ggcacaacag acaatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_AR074365 nrnl1 Sequence 1 from patent US 5952546. 15397 bp unidentified QL-CON-00-014 176 bp View
KJ433387.1 nt Cloning vector pAMNPT-MCS, complete... 5694 bp Cloning vector pAMNPT-MCS QL-CON-00-014 176 bp View
AR074365.1 emblrelpat Sequence 1 from patent US 5952546. 15397 bp unidentified QL-CON-00-014 176 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.