Amplicon details

Amplicon:

530 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaaaaa aaggataggt
151   gcagagactc aatggaagtt gttctaacaa atggagttga ctgcgccggt
201   agaggaatct ttccacggaa actttagaaa ggatgaagga taaacccatc
251   tattgaatac tatatcaaat gattaatgtt ggcccgaatc tgttttttta
301   atatgaaaat ggaaaaatcg atgtgaattt atttcacgtt gaagaataaa
351   tcgaatattc atcgactcat tcactccata gttcgataga tcttttaaag
401   aacttattaa tcggacgaga ataaagatag agtcccattc tacatgtcaa
451   taccggcaac aatgaaattt atagtaagag gaaaatccgt cgactttaaa
501   aatcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT634149.1 nt Salvia sp. HW-2020 plastid, complet... 152658 bp Salvia sp. HW-2020 QL-PLN-00-007 530 bp View
MK344723.1 nt Salvia przewalskii plastid, complet... 152678 bp Salvia przewalskii QL-PLN-00-007 530 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.