Amplicon details

Amplicon:

529 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaaaaa aggataggtg
151   cagagactca atggaagttg ttctaacaaa tggagttgat tgcgccggta
201   gaggaatctt tccacggaaa ctttagaaag gatgaaggat aaacccatct
251   attgaatact atatcaaatg attaatgttg gcccgaatct gtttttttaa
301   tatgaaaatg taaaaatcga tgtgaattta tttcacgttg aagaataaat
351   cgaatattca tcaactcatt cactccatag ttcgatagat cttttaaaga
401   acttattaat cggacgagaa taaagataga gtcccattct acatgtcaat
451   accggcaaca atgaaattta tagtaagagg aaaatccgtc gactttaaaa
501   atcgtgaggg ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT634135.1 nt Salvia przewalskii plastid, complet... 151316 bp Salvia przewalskii QL-PLN-00-007 529 bp View
KC414298.1 nt Salvia pauciflora isolate 511190033... 888 bp Salvia pauciflora QL-PLN-00-007 529 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.