Amplicon details

Amplicon:

584 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aactaaaaat
101   gggcaatcct gagccaaatc tttttttttc aaaaaaggtt tttttttgaa
151   actcgaataa aaaaagatag gtgcagagac tcaatggaag ctgttctaac
201   gaatggagtt gactacgttg tgttggtagc cggaatcctt ctatcgaaat
251   taaaaaaagg atgactatat atctaataca tacgtataca tactgacata
301   tcaaacgatt aatcatgacc cgaattagta ttatatatat gcaaaattca
351   gagttattgt ggatctattc caatcgaagt tgaaggaaga acagaatatt
401   taatgatcaa atcattcatt ccagggtttg ataggccttt actttttttt
451   gacaaactga ttaatcggac gagaataaag agagagtccc attctacatg
501   tcaataccga caacaatgaa atttatagta agaggaaaat ccgtcgactt
551   taaaaatcgt gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR260154.1 nt Hemerocallis citrina cultivar Bayue... 156120 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260158.1 nt Hemerocallis citrina cultivar Siyue... 156116 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260159.1 nt Hemerocallis citrina cultivar Quxia... 156089 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260160.1 nt Hemerocallis citrina cultivar Shayu... 156081 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260161.1 nt Hemerocallis citrina isolate 127 cu... 156052 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260162.1 nt Hemerocallis citrina cultivar Mengz... 156117 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260163.1 nt Hemerocallis citrina isolate 129 cu... 156068 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260165.1 nt Hemerocallis citrina cultivar Daoji... 156082 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260166.1 nt Hemerocallis citrina cultivar Dawuz... 156048 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260167.1 nt Hemerocallis citrina cultivar Xiyez... 156088 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260171.1 nt Hemerocallis citrina cultivar Qingz... 156109 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260176.1 nt Hemerocallis hybrid cultivar isolat... 156082 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260178.1 nt Hemerocallis citrina isolate Meng c... 156110 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260179.1 nt Hemerocallis citrina cultivar Chazi... 156089 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
MN872235.1 nt Hemerocallis citrina chloroplast, c... 156088 bp Hemerocallis citrina QL-PLN-00-007 584 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.