Amplicon details |
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Amplicon: |
567 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg 251 ataaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg 301 attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa 351 ttgttgtgaa tagattccac attgaagaag gaatcgaata ttcattgatc 401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg 451 gacgagaata aagatagagt cccgttctac atgtcaatgt cggcaacaat 501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt 551 caagtccctc tatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MZ458139.1 | nt | Randia truncata voucher Cultivated ... | 1726 bp | Randia truncata | QL-PLN-00-007 | 567 bp | View |
| HM164334.1 | nt | Randia aculeata voucher F.G.x.1-145... | 1712 bp | Randia aculeata | QL-PLN-00-007 | 567 bp | View |
| MZ458133.1 | nt | Randia brenesii voucher Tuberquia 5... | 1712 bp | Randia brenesii | QL-PLN-00-007 | 567 bp | View |
| MZ458136.1 | nt | Randia ciliolata voucher Rova 2244 ... | 1736 bp | Randia ciliolata | QL-PLN-00-007 | 567 bp | View |
| KF965251.1 | nt | Randia aculeata isolate BQ085 trnT-... | 1654 bp | Randia aculeata | QL-PLN-00-007 | 567 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.