Amplicon details |
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Amplicon: |
565 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggtacagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagttgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaagtgaa agataaaggt atatacgtat tgaatactat atcaaatgat 301 taatgacgac tcgactgaat ctgtattttt tatattaaaa gggaagaatt 351 ggtttgaata gattccacat taaagaaaga atcgaatatt cattgattaa 401 atgattcact ccatagtctg atagatcttt tcaagaattg attaatcgga 451 cgagaataaa gatagagccc ggttctacat gtcaatgtcg gcaacaatga 501 aatttatagt aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca 551 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| HG970765.1 | nt | Ixora finlaysoniana chloroplast trn... | 1665 bp | Ixora finlaysoniana | QL-PLN-00-007 | 565 bp | View |
| KY378663.1 | nt | Ixora hookeri chloroplast, partial ... | 128306 bp | Ixora hookeri | QL-PLN-00-007 | 565 bp | View |
| EU817466.1 | nt | Ixora finlaysoniana trnT-trnL inter... | 1674 bp | Ixora finlaysoniana | QL-PLN-00-007 | 565 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.