Amplicon details |
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Amplicon: |
565 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt cagaaaccaa aggtagagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagttgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaagtgaa agataaaggt atatacgtat tgaatactat atcaaatgat 301 taatgacgac tcgactgaat ctgtattttt tatatgaaaa cggaagaatt 351 ggtgtgaata gattccacat taaagaaaga atcgaatatt cattgattaa 401 atgattcact ccatagtctg atagatcttt tcaagaattg attaatcgga 451 caagaataaa gatagagccc cgttctacat gtcaatgtcg gcaacaatga 501 aatttatagt aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca 551 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| EU817462.1 | nt | Ixora moorensis trnT-trnL intergeni... | 1604 bp | Ixora moorensis | QL-PLN-00-007 | 565 bp | View |
| FJ150564.1 | nt | Ixora jourdanii voucher Mouly 513 (... | 1543 bp | Ixora jourdanii | QL-PLN-00-007 | 565 bp | View |
| FJ150568.1 | nt | Ixora marquesensis voucher Mouly 50... | 1598 bp | Ixora marquesensis | QL-PLN-00-007 | 565 bp | View |
| FJ150580.1 | nt | Ixora raiateensis voucher Mouly et ... | 1598 bp | Ixora raiateensis | QL-PLN-00-007 | 565 bp | View |
| FJ150582.1 | nt | Ixora setchellii voucher Mouly et a... | 1572 bp | Ixora setchellii | QL-PLN-00-007 | 565 bp | View |
| FJ150601.1 | nt | Ixora st-johnii voucher Mouly 450 (... | 1611 bp | Ixora st-johnii | QL-PLN-00-007 | 565 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.