JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

567 bp

1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaacaa aggttcagaa
151   agtgaaaagg ggataggtgc agagactcaa cggaagttgt tctaacaaat
201   ggagttggct gcattagtag agaaatcttt ccatctaaaa ttccgaaagg
251   gtaaagtgaa ggataaacgt atatatacgt attgaatact atatcaaatg
301   attaatgacg actcgactaa atctgtattt tttatatgaa aacggaagaa
351   ttggtgtgaa tagattccac attgaagaaa gaatcgaata gtcattgatc
401   aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg
451   gacgagaata aagatagagt cctgttctac atgtcaatgt cggcaacaat
501   gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt
551   caagtccctc tatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
AM117370.1	nt	Leptactina delagoensis chloroplast ...	1713 bp	Leptactina delagoensis	QL-PLN-00-007	567 bp	View
KF965220.1	nt	Leptactina platyphylla isolate H019...	1674 bp	Leptactina platyphylla	QL-PLN-00-007	567 bp	View
KM592109.1	nt	Dictyandra arborescens voucher Schm...	1679 bp	Leptactina arborescens	QL-PLN-00-007	567 bp	View
KM592117.1	nt	Leptactina delagoensis voucher Luke...	1679 bp	Leptactina delagoensis	QL-PLN-00-007	567 bp	View
KM592119.1	nt	Leptactina involucrata voucher Davi...	1662 bp	Leptactina involucrata	QL-PLN-00-007	567 bp	View
KM592122.1	nt	Leptactina papyrophloea voucher Luk...	1679 bp	Leptactina papyrophloea	QL-PLN-00-007	567 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.