Amplicon details |
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Amplicon: |
567 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 actcactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcattagtag agaaatcttt ccatctaaaa ttccgaaagg 251 gtaaagtgaa ggataaacgt atatatacgt attgaatact atgtcaaatg 301 attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa 351 ttggtgtgaa tagattccac attgaagaaa gaatcgaata ttcattgatc 401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg 451 gacgagaata aagatagagt cctgttctac atgtcaatgt cggcaacaat 501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt 551 caagtccctc tatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KJ815612.1 | nt | Tarenna malacophylla voucher Razafi... | 1682 bp | Helictosperma malacophylla | QL-PLN-00-007 | 567 bp | View |
| KJ815616.1 | nt | Pavetteae sp. Bremer et al. 5168 tr... | 1668 bp | Pavetteae sp. Bremer et al. 5168 | QL-PLN-00-007 | 567 bp | View |
| KJ815619.1 | nt | Paracephaelis cinerea voucher Breme... | 1631 bp | Paracephaelis cinerea | QL-PLN-00-007 | 567 bp | View |
| KJ815620.1 | nt | Paracephaelis cinerea voucher De Bl... | 1668 bp | Paracephaelis cinerea | QL-PLN-00-007 | 567 bp | View |
| KJ815621.1 | nt | Paracephaelis cinerea voucher Mouly... | 1680 bp | Paracephaelis cinerea | QL-PLN-00-007 | 567 bp | View |
| KJ815623.1 | nt | Paracephaelis tiliacea voucher Kain... | 1628 bp | Paracephaelis tiliacea | QL-PLN-00-007 | 567 bp | View |
| KJ815624.1 | nt | Paracephaelis trichantha voucher Fr... | 1661 bp | Paracephaelis trichantha | QL-PLN-00-007 | 567 bp | View |
| KJ815625.1 | nt | Paracephaelis sp. Razakamalala RZK ... | 1707 bp | Paracephaelis sp. Razakamalala RZK 6400 | QL-PLN-00-007 | 567 bp | View |
| KJ815626.1 | nt | Pavetteae sp. Razafimandimbison et ... | 1633 bp | Pavetteae sp. Razafimandimbison et al. 1239 | QL-PLN-00-007 | 567 bp | View |
| KJ815630.1 | nt | Tarenna alleizettei voucher Karehed... | 1672 bp | Tarenna alleizettei | QL-PLN-00-007 | 567 bp | View |
| KJ815635.1 | nt | Tarenna grevei voucher Razafimandim... | 1698 bp | Tarenna grevei | QL-PLN-00-007 | 567 bp | View |
| KJ815637.1 | nt | Tarenna grevei voucher Razafimandim... | 1654 bp | Tarenna grevei | QL-PLN-00-007 | 567 bp | View |
| KJ815638.1 | nt | Tarenna grevei voucher Mouly 624 (P... | 1678 bp | Tarenna grevei | QL-PLN-00-007 | 567 bp | View |
| KJ815645.1 | nt | Tarenna sechellensis voucher Bremer... | 1681 bp | Tarenna sechellensis | QL-PLN-00-007 | 567 bp | View |
| KJ815651.1 | nt | Tarenna thouarsiana voucher Kainula... | 1661 bp | Tarenna thouarsiana | QL-PLN-00-007 | 567 bp | View |
| KJ815652.1 | nt | Tarenna uniflora voucher Kainulaine... | 1670 bp | Tarenna uniflora | QL-PLN-00-007 | 567 bp | View |
| KJ815622.1 | nt | Paracephaelis saxatilis voucher Raz... | 1626 bp | Paracephaelis saxatilis | QL-PLN-00-007 | 567 bp | View |
| KJ815629.1 | nt | Schizenterospermum rotundifolium vo... | 1621 bp | Schizenterospermum rotundifolium | QL-PLN-00-007 | 567 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.