Amplicon details |
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Amplicon: |
567 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 actcactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcattagtag agaaatcttt ccatctaaaa ttccgaaagg 251 gtaaagtgaa ggataaacgt atatatacgt attgaatact atgtcaaatg 301 attaatgacg actcgactga atctgtattt tttatatgaa aacggaagaa 351 ttggtgtgaa tagattccac attgaagaaa gaatcgaata ttcattgatc 401 aaatgattca ctccatagtc tgatagatct tttcaagaat tgattaatcg 451 gacgagaata aagatagagt cctgttctac atgtcaatgt cggcaacaat 501 gaaatttata gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt 551 caagtccctc tatcccc |
Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
---|---|---|---|---|---|---|---|
AM117355.1 | nt | Coptosperma sp. Razafimandimbison 5... | 1727 bp | Coptosperma sp. Razafimandimbison 525 | QL-PLN-00-007 | 567 bp | View |
KF965235.1 | nt | Paracephaelis sp. De Block 1174 iso... | 1685 bp | Paracephaelis sp. De Block 1174 | QL-PLN-00-007 | 567 bp | View |
KF965257.1 | nt | Schizenterospermum sp. Davis 2580 i... | 1672 bp | Schizenterospermum sp. Davis 2580 | QL-PLN-00-007 | 567 bp | View |
KM592102.1 | nt | Coptosperma sp. B SJ-2014 trnT-trnL... | 1671 bp | Coptosperma sp. B SJ-2014 | QL-PLN-00-007 | 567 bp | View |
KM592103.1 | nt | Coptosperma sp. C SJ-2014 trnT-trnL... | 1709 bp | Coptosperma sp. C SJ-2014 | QL-PLN-00-007 | 567 bp | View |
KM592104.1 | nt | Coptosperma sp. D SJ-2014 trnT-trnL... | 1667 bp | Coptosperma sp. D SJ-2014 | QL-PLN-00-007 | 567 bp | View |
KM592106.1 | nt | Coptosperma sp. A SJ-2014 trnT-trnL... | 1687 bp | Coptosperma sp. A SJ-2014 | QL-PLN-00-007 | 567 bp | View |
KM592127.1 | nt | Paracephaelis cinerea voucher De Bl... | 1667 bp | Paracephaelis cinerea | QL-PLN-00-007 | 567 bp | View |
KM592128.1 | nt | Paracephaelis saxatilis voucher De ... | 1667 bp | Paracephaelis saxatilis | QL-PLN-00-007 | 567 bp | View |
KM592129.1 | nt | Paracephaelis tiliacea voucher Groe... | 1667 bp | Paracephaelis tiliacea | QL-PLN-00-007 | 567 bp | View |
KM592178.1 | nt | Tarenna alleizettei voucher De Bloc... | 1668 bp | Tarenna alleizettei | QL-PLN-00-007 | 567 bp | View |
KM592182.1 | nt | Tarenna thouarsiana voucher De Bloc... | 1667 bp | Tarenna thouarsiana | QL-PLN-00-007 | 567 bp | View |
KJ815588.1 | nt | Coptosperma sp. Eriksson et al. T95... | 1660 bp | Coptosperma sp. Eriksson et al. T957 | QL-PLN-00-007 | 567 bp | View |
KJ815589.1 | nt | Coptosperma bernierianum voucher Sc... | 1721 bp | Coptosperma bernierianum | QL-PLN-00-007 | 567 bp | View |
KJ815594.1 | nt | Coptosperma humblotii voucher Breme... | 1612 bp | Coptosperma humblotii | QL-PLN-00-007 | 567 bp | View |
KJ815597.1 | nt | Coptosperma mitochondrioides vouche... | 1670 bp | Coptosperma mitochondrioides | QL-PLN-00-007 | 567 bp | View |
KJ815601.1 | nt | Coptosperma sp. Karehed et al. 227 ... | 1677 bp | Coptosperma sp. Karehed et al. 227 | QL-PLN-00-007 | 567 bp | View |
KJ815603.1 | nt | Coptosperma sp. Kainulainen et al. ... | 1721 bp | Coptosperma sp. Kainulainen et al. 76 | QL-PLN-00-007 | 567 bp | View |
KJ815604.1 | nt | Coptosperma sp. Bremer et al. 5297 ... | 1695 bp | Coptosperma sp. Bremer et al. 5297 | QL-PLN-00-007 | 567 bp | View |
KJ815611.1 | nt | Coptosperma zygoon voucher Wild 229... | 1669 bp | Coptosperma zygoon | QL-PLN-00-007 | 567 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.