Amplicon details

Amplicon:

546 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tagtatggaa
51    acctactaag tgatagcttc caaatgcagg gaaccctggg atattttgaa
101   tgggcaatcc tgagccaaat ccggtttata gaaacatagt tttctttcct
151   agaaaaggat aggtgcagag actcgacgga agctattcta acgaatgaat
201   atcatttgaa tttgatcctg tacactatct acagagtgcc ctctgtattt
251   aaaaattgaa aaagtgatac catccataaa acaaaactaa cgattagaac
301   ttgagtcgtt ctaggctttt tttttttagg agcctagctt cgaagtgaag
351   gtaatgactc attaagtaat ccaattaaga gcttctctta gaaataaagt
401   gaattcaatt attggaatta atgattggac gaggataaag atagagtcca
451   attctacatg tcattgcaat aacaacaatg caaattgcag taggatgaaa
501   atccgttggt tttatagacc gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF660607.1 nt Cephalotaxus harringtonia voucher D... 830 bp Cephalotaxus harringtonia QL-PLN-00-007 546 bp View
EF660617.1 nt Cephalotaxus drupacea voucher 20070... 830 bp Cephalotaxus drupacea QL-PLN-00-007 546 bp View
EF660618.1 nt Cephalotaxus fortunei var. alpina v... 830 bp Cephalotaxus fortunei var. alpina QL-PLN-00-007 546 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.