Amplicon details

Amplicon:

553 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaagaaa
101   aaagggcaat cctgagccaa atcctgtttt cttaaaacaa aagttcagaa
151   aactaaaaaa aggataggtg cagagactca atggaagctg ttctaacaaa
201   tggagttggt tgcgctgata gaggaatgaa acttcagaaa ggatgaagga
251   taaaggtatc tattgaatac tctatcaaaa tcaaatgatt gattaatgat
301   ggcccaaatc tctatctgta tttttgaata cgaaaagtgg aagaattggt
351   gtgaatttct tccataaaga atattcattc atcaaatcat tcactccata
401   gtccgataga tcttttttaa aagatctgat taatcggacg agaataaaga
451   tagagtccca ttctacatgt caataccggc aacaatgaaa tttatagtaa
501   aaggaaaatc cgtcgacttt taaaatcgtg agggttcaag tccctctatc
551   ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU828148.1 nt Agalinis divaricata isolate 5FL tRN... 1659 bp Agalinis divaricata QL-PLN-00-007 553 bp View
EU828147.1 nt Agalinis divaricata isolate 3FL tRN... 1670 bp Agalinis divaricata QL-PLN-00-007 553 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.