Amplicon details

Amplicon:

591 bp
1     cgaaatcggt agacgctacg gacttaattg gattgggcct tggtatggaa
51    acccgctgag tgagaacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctatttt ccaaaaacaa aggttcagaa
151   agtgaaaaaa agggaaaggg ataggtgcag agactcaatg gaagctgttc
201   taacaaatgg agttggctgc ggtagtcaag aagtctttcc atcaaaaatt
251   cataaactat aagtattaag gatgaagtga aggataaacg tatatacata
301   cgtagtcaat agtatattaa atgagtaatg ataacccgaa tgaatcttta
351   tttttctata aaaaaataaa gaattgttct taatagattc cacgtttaga
401   aaagaatcga atattcattg atcaaatgat tcactccata gtctgataga
451   tcctttcacg aactgattaa tcggacgaga ataaagatag agtcccattc
501   tacatgtcaa tgtcggcaac aatgaaattt atagttaaga ggaaaatccg
551   tcgactttta aaatcgtgag ggttcaagtc cctctatccc c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU145544.1 nt Anthospermum herbaceum isolate H72 ... 1711 bp Anthospermum herbaceum QL-PLN-00-007 591 bp View
MK141613.1 nt Anthospermum herbaceum isolate cX90... 1711 bp Anthospermum herbaceum QL-PLN-00-007 591 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.