Amplicon details |
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Amplicon: |
618 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa 251 ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag 301 atagcaaacg attaatcaca gagcccatat tataatattg gttctttatt 351 cttttttaga atgaaatttg aaatagaaat gattatgaaa taaaaaattc 401 ataatttttt tagaattatt gtgaatccat tccaatcgaa tatttagtaa 451 tcaaatcctt cagttcaaag ttttgaggtc tttaaaaaag tggattaatc 501 ggacgaggac aaagagagag tcccattcta catgtcaata ctgacaacaa 551 tgaaatttct agtaaaagga aaatccgtcg actttataag tcgtgagggt 601 tcaagtccct ctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| DQ354020.1 | nt | Poa atropidiformis voucher Soreng &... | 1818 bp | Poa atropidiformis | QL-PLN-00-007 | 618 bp | View |
| DQ354023.1 | nt | Poa acinaciphylla voucher Soreng & ... | 1873 bp | Poa acinaciphylla | QL-PLN-00-007 | 618 bp | View |
| EU792468.1 | nt | Dissanthelium brevifolium voucher P... | 1807 bp | Poa parvifolia | QL-PLN-00-007 | 618 bp | View |
| GQ324445.1 | nt | Poa poiformis voucher CAN:Gillespie... | 1812 bp | Poa poiformis | QL-PLN-00-007 | 618 bp | View |
| JF904763.1 | nt | Poa atropidiformis voucher Peterson... | 1815 bp | Poa atropidiformis | QL-PLN-00-007 | 618 bp | View |
| JF904767.1 | nt | Poa parvifolia voucher Peterson 181... | 1806 bp | Poa parvifolia | QL-PLN-00-007 | 618 bp | View |
| JF904771.1 | nt | Poa congesta voucher Peterson 16663... | 1807 bp | Poa congesta | QL-PLN-00-007 | 618 bp | View |
| JF904772.1 | nt | Poa congesta voucher Peterson 18172... | 1802 bp | Poa congesta | QL-PLN-00-007 | 618 bp | View |
| JF904776.1 | nt | Poa macusaniensis voucher Peterson ... | 1821 bp | Poa macusaniensis | QL-PLN-00-007 | 618 bp | View |
| JF904780.1 | nt | Poa amplivaginata voucher Peterson ... | 1815 bp | Poa amplivaginata | QL-PLN-00-007 | 618 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.