European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 215 bp 
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgaggac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY944582.1 nt Cloning vector LUCTRAP-2, complete ... 6145 bp Cloning vector LUCTRAP-2 QL-ELE-00-002 215 bp View
AY968054.1 nt Cloning vector LUCTRAP-3(GW), compl... 7272 bp Cloning vector LUCTRAP-3(GW) QL-ELE-00-002 215 bp View
DQ073044.1 nt Cloning vector LUCTRAP, complete se... 5990 bp Cloning vector LUCTRAP QL-ELE-00-002 215 bp View
EU048864.1 nt Cloning vector pGreenII 0029, T-DNA... 2215 bp Cloning vector pGreenII 0029 QL-ELE-00-002 215 bp View
EU048865.1 nt Cloning vector pGreenII 0029 62-SK,... 2247 bp Cloning vector pGreenII 0029 62-SK QL-ELE-00-002 215 bp View
JF909455.1 nt Cloning vector pPLV02, complete seq... 5069 bp Cloning vector pPLV02 QL-ELE-00-002 215 bp View
JF909459.1 nt Cloning vector pPLV06, complete seq... 5827 bp Cloning vector pPLV06 QL-ELE-00-002 215 bp View
JF909461.1 nt Cloning vector pPLV08, complete seq... 5827 bp Cloning vector pPLV08 QL-ELE-00-002 215 bp View
JF909464.1 nt Cloning vector pPLV11, complete seq... 6537 bp Cloning vector pPLV11 QL-ELE-00-002 215 bp View
JF909467.1 nt Cloning vector pPLV14, complete seq... 7077 bp Cloning vector pPLV14 QL-ELE-00-002 215 bp View
JF909470.1 nt Cloning vector pPLV17, complete seq... 5797 bp Cloning vector pPLV17 QL-ELE-00-002 215 bp View
JF909473.1 nt Cloning vector pPLV20, complete seq... 5797 bp Cloning vector pPLV20 QL-ELE-00-002 215 bp View
JF909476.1 nt Cloning vector pPLV23, complete seq... 6507 bp Cloning vector pPLV23 QL-ELE-00-002 215 bp View
JF909479.1 nt Cloning vector pPLV26, complete seq... 6395 bp Cloning vector pPLV26 QL-ELE-00-002 215 bp View
JF909483.1 nt Cloning vector pPLV30, complete seq... 9152 bp Cloning vector pPLV30 QL-ELE-00-002 215 bp View
JF909486.1 nt Cloning vector pPLV33, complete seq... 5251 bp Cloning vector pPLV33 QL-ELE-00-002 215 bp View
MK896904.1 nt Plant binary expression vector pNC-... 6122 bp Plant binary expression vector pNC-Green0029-35S QL-ELE-00-002 215 bp View
LC636137.1 nt Binary vector pGK-YC9 DNA, complete... 11566 bp Binary vector pGK-YC9 QL-ELE-00-002 215 bp View
KP293935.1 nt Cloning vector pJF753, complete seq... 10701 bp Cloning vector pJF753 QL-ELE-00-002 215 bp View
AY944581.1 nt Cloning vector LUCTRAP-1, complete ... 6149 bp Cloning vector LUCTRAP-1 QL-ELE-00-002 215 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.