Amplicon details

Amplicon:

618 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   ttcgaaaaag aagggcttta tacatctaat aaacacgtat agatactgac
301   atagcaaacg attaatcaca gaacccatat tataatatag gttctttatt
351   cttttttaga atttagaatg aaatagaaat gattatgaaa taaaaaattc
401   tgaatttttt tagaattatt ggaaatccat tccaatcgaa tatttagtaa
451   tcaaatcctt caattcaaag ttttgaggtc tttaaaaaag tggattaatc
501   ggacgaggac aaagagagag tcccattcta catgtcaata ctgacaacaa
551   tgaaatttct agtaaaagga aaatccgtcg actttataag tcgtgagggt
601   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ353976.1 nt Arctopoa tibetica voucher Soreng & ... 1840 bp Arctopoa tibetica QL-PLN-00-007 618 bp View
EU792444.1 nt Arctopoa tibetica voucher Olonova 2... 1827 bp Arctopoa tibetica QL-PLN-00-007 618 bp View
EU792445.1 nt Arctopoa tibetica voucher Soreng et... 1903 bp Arctopoa tibetica QL-PLN-00-007 618 bp View
KX522671.1 nt Arctopoa tibetica voucher W6 30476 ... 1859 bp Arctopoa tibetica QL-PLN-00-007 618 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.