Amplicon details

Amplicon:

620 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   ttcgagaaag aagggcttta tacatctaat aaacacgtat agatactgac
301   atagcaaacg attaatcaca gaacctatat tataatatat ggttctttat
351   tcttttttag aatgaaattt gaaatagaaa tgattatgaa ataaaaaatt
401   cagaattttt tttagaatta ttgtgaatac attccaatcg aatatttagt
451   aatcaaatcc ttcaattcaa agttttgagg tctttaaaaa agttgattaa
501   tcggacgagg acaaagagag agtcccattc tacatgtcaa tactgacaac
551   aatgaaattt ctagtaaaag gaaaatccgt cgactttata agtcgtgagg
601   gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ353969.1 nt Arctagrostis latifolia voucher Gill... 1808 bp Arctagrostis latifolia QL-PLN-00-007 620 bp View
EU792434.1 nt Arctagrostis latifolia voucher Arch... 1787 bp Arctagrostis latifolia QL-PLN-00-007 620 bp View
MT094313.1 nt Arctagrostis latifolia subsp. latif... 135682 bp Arctagrostis latifolia subsp. latifolia QL-PLN-00-007 620 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.