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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 179 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgatta
51    cgttaagcat gtaataatta acatgtaatg catgacgtta tttatgagat
101   gggtttttat gattagagtc ccgcaattat acatttaata cgcgatagaa
151   aacaaaatat agcgcgcaaa ctaggataa

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EF090412.1 nt Control vector GST6-LUC-NOS-At2g477... 5225 bp Control vector GST6-LUC-NOS-At2g47730 QL-ELE-00-006 179 bp View
EF090415.1 nt Control vector GCC1-LUC-NOS, comple... 4854 bp Control vector GCC1-LUC-NOS QL-ELE-00-006 179 bp View
MO546168.1 emblrelpat Sequence 41 from patent US 10487337. 2771 bp unidentified QL-ELE-00-006 179 bp View
MO546174.1 emblrelpat Sequence 47 from patent US 10487337. 2651 bp unidentified QL-ELE-00-006 179 bp View
EF090413.1 nt Control vector HSP18.2-LUC-NOS-At5g... 5452 bp Control vector HSP18.2-LUC-NOS-At5g59720 QL-ELE-00-006 179 bp View
EF090414.1 nt Control vector ARR6-LUC-NOS-At5g629... 7129 bp Control vector ARR6-LUC-NOS-At5g62920 QL-ELE-00-006 179 bp View
JX996118.1 nt Binary plant gene expression vector... 17013 bp Binary plant gene expression vector pKM24-MD1 QL-ELE-00-006 179 bp View
KF951257.1 nt Binary vector pKM24KHibm8, complete... 14226 bp Binary vector pKM24KHibm8 QL-ELE-00-006 179 bp View
AY488511.1 nt Gene trapping vector pEU334bn, comp... 21188 bp Gene trapping vector pEU334bn QL-ELE-00-006 179 bp View
DQ225747.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NB QL-ELE-00-006 179 bp View
AY488511.1 nt Gene trapping vector pEU334bn, comp... 21188 bp Gene trapping vector pEU334bn QL-ELE-00-006 179 bp View
EF090409.1 nt Control vector RD29A-LUC-NOS-At5g52... 5087 bp Control vector RD29A-LUC-NOS-At5g52310 QL-ELE-00-006 179 bp View
AY488510.1 nt Gene trapping vector pEU334AN, comp... 21188 bp Gene trapping vector pEU334AN QL-ELE-00-006 179 bp View
EF090410.1 nt Control vector AtGH3-LUC-NOS-At2g23... 8247 bp Control vector AtGH3-LUC-NOS-At2g23710 QL-ELE-00-006 179 bp View
AY488510.1 nt Gene trapping vector pEU334AN, comp... 21188 bp Gene trapping vector pEU334AN QL-ELE-00-006 179 bp View
EF090411.1 nt Control vector WRKY29-LUC-NOS-At4g2... 7292 bp Control vector WRKY29-LUC-NOS-At4g23550 QL-ELE-00-006 179 bp View
DQ225746.1 nt Gene trapping Ds/T-DNA vector pUR22... 22828 bp Gene trapping Ds/T-DNA vector pUR224NA QL-ELE-00-006 179 bp View
KF661330.1 nt Binary vector pKGFP::P85-P87::GUS e... 16294 bp Binary vector pKGFP::P85-P87::GUS QL-ELE-00-006 179 bp View
HM036220.1 nt Binary vector pKM24KH, complete seq... 12945 bp Binary vector pKM24KH QL-ELE-00-006 179 bp View
EF090416.1 nt Control vector pFRK1-LUC-NOS-At2g19... 7525 bp Control vector pFRK1-LUC-NOS-At2g19190 QL-ELE-00-006 179 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.