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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 195 bp 
1     gctcctacaa atgccatcat tgcgataaag gaaaggccat cgttgaagat
51    gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatatctc cactgacgta agggatgacg cacaatccca ctatc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MG733987.1 nt Binary vector pCNM3. 9409 bp Binary vector pCNM3 QL-ELE-00-001 195 bp View
AB626689.1 nt Gateway vector pUGW54 DNA, complete... 6688 bp Gateway vector pUGW54 QL-ELE-00-001 195 bp View
MB014658.1 emblrelpat JP 2018504119-A/31: ROTAVIRUS-LIKE ... 4068 bp synthetic construct QL-ELE-00-001 195 bp View
MB014662.1 emblrelpat JP 2018504119-A/35: ROTAVIRUS-LIKE ... 2634 bp synthetic construct QL-ELE-00-001 195 bp View
MB014666.1 emblrelpat JP 2018504119-A/39: ROTAVIRUS-LIKE ... 2268 bp synthetic construct QL-ELE-00-001 195 bp View
MB014668.1 emblrelpat JP 2018504119-A/41: ROTAVIRUS-LIKE ... 4540 bp synthetic construct QL-ELE-00-001 195 bp View
MB014669.1 emblrelpat JP 2018504119-A/42: ROTAVIRUS-LIKE ... 4056 bp synthetic construct QL-ELE-00-001 195 bp View
MB014671.1 emblrelpat JP 2018504119-A/44: ROTAVIRUS-LIKE ... 2577 bp synthetic construct QL-ELE-00-001 195 bp View
MB014673.1 emblrelpat JP 2018504119-A/46: ROTAVIRUS-LIKE ... 3711 bp synthetic construct QL-ELE-00-001 195 bp View
HQ540318.1 nt Binary vector pCMIRT15, complete se... 10759 bp Binary vector pCMIRT15 QL-ELE-00-001 195 bp View
MB435678.1 emblrelpat JP 2018082718-A/5: Soybean plant an... 2014 bp synthetic construct QL-ELE-00-001 195 bp View
MG881768.1 nt Transformation vector pBHRF-108, co... 7024 bp Transformation vector pBHRF-108 QL-ELE-00-001 195 bp View
FJ467933.1 emblreltgn Carica papaya transgenic cultivar R... 15595 bp Carica papaya QL-ELE-00-001 195 bp View
MG881769.1 nt Transformation vector pBHRF-108-Ype... 10779 bp Transformation vector pBHRF-108-Ypet QL-ELE-00-001 195 bp View
HQ698851.1 nt Cloning vector pSOL8DCL2, complete ... 10231 bp Cloning vector pSOL8DCL2 QL-ELE-00-001 195 bp View
MF375491.1 nt Ti plasmid binary vector pGSh16.101... 17356 bp Ti plasmid binary vector pGSh16.1010 QL-ELE-00-001 195 bp View
NRN_JA470513 nrnl1 Sequence 56 from Patent WO2011079005. 16257 bp unidentified QL-ELE-00-001 195 bp View
MB435679.1 emblrelpat JP 2018082718-A/6: Soybean plant an... 7484 bp synthetic construct QL-ELE-00-001 195 bp View
MF479729.1 nt Ti plasmid binary vector pGSh16.101... 16639 bp Ti plasmid binary vector pGSh16.1012 QL-ELE-00-001 195 bp View
JC740234.1 emblrelpat Sequence 4 from Patent EP2760882. 4903 bp synthetic construct QL-ELE-00-001 195 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.