Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JA390618.1 emblrelpat Sequence 1 from Patent WO2011054729. 11149 bp Solanum tuberosum QL-ELE-00-007 180 bp View
LT725205.1 nt Gateway expression vector pAGRIKOLA... 9435 bp Gateway expression vector pAGRIKOLA-CATMA3a02380 QL-ELE-00-007 180 bp View
AP018609.1 nt Gateway vector R4pMpGWB295 DNA, com... 11484 bp Gateway vector R4pMpGWB295 QL-ELE-00-007 180 bp View
LT725206.1 nt Gateway expression vector pAGRIKOLA... 9475 bp Gateway expression vector pAGRIKOLA-CATMA3a03000 QL-ELE-00-007 180 bp View
MX624906.1 emblrelpat Sequence 219 from patent US 10988788. 12847 bp unidentified QL-ELE-00-007 180 bp View
LT725207.1 nt Gateway expression vector pAGRIKOLA... 9565 bp Gateway expression vector pAGRIKOLA-CATMA3a03070 QL-ELE-00-007 180 bp View
AP018610.1 nt Gateway vector R4pMpGWB301 DNA, com... 12177 bp Gateway vector R4pMpGWB301 QL-ELE-00-007 180 bp View
LT725208.1 nt Gateway expression vector pAGRIKOLA... 9635 bp Gateway expression vector pAGRIKOLA-CATMA3a04150 QL-ELE-00-007 180 bp View
OF130103.1 emblrelpat KR 1020200135571-A/49: PLANT REGULA... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725209.1 nt Gateway expression vector pAGRIKOLA... 9515 bp Gateway expression vector pAGRIKOLA-CATMA3a04911 QL-ELE-00-007 180 bp View
AP018611.1 nt Gateway vector R4pMpGWB304 DNA, com... 13983 bp Gateway vector R4pMpGWB304 QL-ELE-00-007 180 bp View
MX624909.1 emblrelpat Sequence 222 from patent US 10988788. 13830 bp unidentified QL-ELE-00-007 180 bp View
LT725211.1 nt Gateway expression vector pAGRIKOLA... 9543 bp Gateway expression vector pAGRIKOLA-CATMA3a05230 QL-ELE-00-007 180 bp View
AP018612.1 nt Gateway vector R4pMpGWB307 DNA, com... 12888 bp Gateway vector R4pMpGWB307 QL-ELE-00-007 180 bp View
LT725212.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA3a06566 QL-ELE-00-007 180 bp View
OF130160.1 emblrelpat KR 1020200135572-A/49: PLANT REGULA... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725213.1 nt Gateway expression vector pAGRIKOLA... 9499 bp Gateway expression vector pAGRIKOLA-CATMA3a06630 QL-ELE-00-007 180 bp View
AP018613.1 nt Gateway vector R4pMpGWB309 DNA, com... 12195 bp Gateway vector R4pMpGWB309 QL-ELE-00-007 180 bp View
MX624912.1 emblrelpat Sequence 225 from patent US 10988788. 13876 bp unidentified QL-ELE-00-007 180 bp View
LT725214.1 nt Gateway expression vector pAGRIKOLA... 9457 bp Gateway expression vector pAGRIKOLA-CATMA3a06870 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.