Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LT725194.1 nt Gateway expression vector pAGRIKOLA... 9447 bp Gateway expression vector pAGRIKOLA-CATMA2c47846 QL-ELE-00-007 180 bp View
AP018603.1 nt Gateway vector R4pMpGWB231 DNA, com... 12486 bp Gateway vector R4pMpGWB231 QL-ELE-00-007 180 bp View
LT725195.1 nt Gateway expression vector pAGRIKOLA... 9893 bp Gateway expression vector pAGRIKOLA-CATMA3a00050 QL-ELE-00-007 180 bp View
MX624897.1 emblrelpat Sequence 210 from patent US 10988788. 13447 bp unidentified QL-ELE-00-007 180 bp View
LT725196.1 nt Gateway expression vector pAGRIKOLA... 9437 bp Gateway expression vector pAGRIKOLA-CATMA3a00132 QL-ELE-00-007 180 bp View
AP018604.1 nt Gateway vector R4pMpGWB239 DNA, com... 11454 bp Gateway vector R4pMpGWB239 QL-ELE-00-007 180 bp View
LT725197.1 nt Gateway expression vector pAGRIKOLA... 9511 bp Gateway expression vector pAGRIKOLA-CATMA3a00210 QL-ELE-00-007 180 bp View
OF130046.1 emblrelpat KR 1020200135570-A/49: PLANT REGULA... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725198.1 nt Gateway expression vector pAGRIKOLA... 9547 bp Gateway expression vector pAGRIKOLA-CATMA3a00265 QL-ELE-00-007 180 bp View
AP018605.1 nt Gateway vector R4pMpGWB254 DNA, com... 10857 bp Gateway vector R4pMpGWB254 QL-ELE-00-007 180 bp View
LT725199.1 nt Gateway expression vector pAGRIKOLA... 9535 bp Gateway expression vector pAGRIKOLA-CATMA3a00327 QL-ELE-00-007 180 bp View
MX624900.1 emblrelpat Sequence 213 from patent US 10988788. 13921 bp unidentified QL-ELE-00-007 180 bp View
LT725200.1 nt Gateway expression vector pAGRIKOLA... 9525 bp Gateway expression vector pAGRIKOLA-CATMA3a00390 QL-ELE-00-007 180 bp View
AP018606.1 nt Gateway vector R4pMpGWB256 DNA, com... 11415 bp Gateway vector R4pMpGWB256 QL-ELE-00-007 180 bp View
HI544540.1 emblrelpat Sequence 47 from Patent EP2179044. 6994 bp synthetic construct QL-ELE-00-007 180 bp View
LT725202.1 nt Gateway expression vector pAGRIKOLA... 9895 bp Gateway expression vector pAGRIKOLA-CATMA3a00540 QL-ELE-00-007 180 bp View
AP018607.1 nt Gateway vector R4pMpGWB257 DNA, com... 10908 bp Gateway vector R4pMpGWB257 QL-ELE-00-007 180 bp View
LT725203.1 nt Gateway expression vector pAGRIKOLA... 9509 bp Gateway expression vector pAGRIKOLA-CATMA3a00600 QL-ELE-00-007 180 bp View
MX624903.1 emblrelpat Sequence 216 from patent US 10988788. 13921 bp unidentified QL-ELE-00-007 180 bp View
LT725204.1 nt Gateway expression vector pAGRIKOLA... 9591 bp Gateway expression vector pAGRIKOLA-CATMA3a01600 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.