Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DI098239.1 emblrelpat Transformation vector using maize A... 12811 bp unidentified QL-ELE-00-007 180 bp View
MH450170.1 nt Plant Stable Overexpression Vector ... 9143 bp Plant Stable Overexpression Vector pRGVcGFP QL-ELE-00-007 180 bp View
LT725135.1 nt Gateway expression vector pAGRIKOLA... 9785 bp Gateway expression vector pAGRIKOLA-CATMA2a33845 QL-ELE-00-007 180 bp View
DI098239.1 emblrelpat Transformation vector using maize A... 12811 bp unidentified QL-ELE-00-007 180 bp View
HI069530.1 emblrelpat Sequence 44 from Patent EP1868426. 3943 bp Zea mays QL-ELE-00-007 180 bp View
LT725136.1 nt Gateway expression vector pAGRIKOLA... 9735 bp Gateway expression vector pAGRIKOLA-CATMA2a34130 QL-ELE-00-007 180 bp View
MH450171.1 nt Plant Stable Overexpression Vector ... 9119 bp Plant Stable Overexpression Vector pRGVcRFP QL-ELE-00-007 180 bp View
LT725137.1 nt Gateway expression vector pAGRIKOLA... 9773 bp Gateway expression vector pAGRIKOLA-CATMA2a34140 QL-ELE-00-007 180 bp View
MS835704.1 emblrelpat Sequence 66 from Patent EP3112465. 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LT725138.1 nt Gateway expression vector pAGRIKOLA... 9537 bp Gateway expression vector pAGRIKOLA-CATMA2a34220 QL-ELE-00-007 180 bp View
MH450172.1 nt Plant Genome Editing Vector pRHCas9... 13079 bp Plant Genome Editing Vector pRHCas9 QL-ELE-00-007 180 bp View
LT725139.1 nt Gateway expression vector pAGRIKOLA... 9489 bp Gateway expression vector pAGRIKOLA-CATMA2a34270 QL-ELE-00-007 180 bp View
LT725140.1 nt Gateway expression vector pAGRIKOLA... 9533 bp Gateway expression vector pAGRIKOLA-CATMA2a34700 QL-ELE-00-007 180 bp View
HD088248.1 emblrelpat Sequence 44 from Patent WO2010080430. 4444 bp synthetic construct QL-ELE-00-007 180 bp View
LT725141.1 nt Gateway expression vector pAGRIKOLA... 9471 bp Gateway expression vector pAGRIKOLA-CATMA2a34840 QL-ELE-00-007 180 bp View
MH450173.1 nt Plant Genome Editing Vector pRGCas9... 12841 bp Plant Genome Editing Vector pRGCas9 QL-ELE-00-007 180 bp View
LT725142.1 nt Gateway expression vector pAGRIKOLA... 9935 bp Gateway expression vector pAGRIKOLA-CATMA2a35200 QL-ELE-00-007 180 bp View
MP255955.1 emblrelpat Sequence 24 from Patent EP3519563. 2343 bp synthetic construct QL-ELE-00-007 180 bp View
LT725143.1 nt Gateway expression vector pAGRIKOLA... 9619 bp Gateway expression vector pAGRIKOLA-CATMA2a35330 QL-ELE-00-007 180 bp View
MP255972.1 emblrelpat Sequence 41 from Patent EP3519563. 2118 bp synthetic construct QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.