Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
HQ154128.1 nt Oryza sativa Japonica Group transge... 6213 bp Oryza sativa Japonica Group QL-ELE-00-006 180 bp View
V00087.1 nt Agrobacterium tumefaciens gene enco... 2521 bp Agrobacterium tumefaciens QL-ELE-00-006 180 bp View
NRN_DJ058152 nrnl1 Corn Plant MON88017 and Composition... 7450 bp unidentified QL-ELE-00-006 180 bp View
M61152.1 nt Artificial T-DNA conferring express... 6082 bp synthetic construct QL-ELE-00-006 180 bp View
NRN_GZ245908 nrnl1 Sequence 364 from patent US 8153859... 8458 bp unidentified QL-ELE-00-006 180 bp View
Z29587.1 nt Expression vector pCOR112N (modifie... 4412 bp synthetic construct QL-ELE-00-006 180 bp View
NRN_CQ876990 nrnl1 Sequence 36 from Patent WO200408121... 12776 bp unidentified QL-ELE-00-006 180 bp View
Z29588.1 nt Expression vector pCOR114N (modifie... 4433 bp synthetic construct QL-ELE-00-006 180 bp View
NRN_GZ245799 nrnl1 Sequence 238 from patent US 8153859... 8457 bp unidentified QL-ELE-00-006 180 bp View
Z29589.1 nt Expression vector pCOR116aN (modifi... 4486 bp synthetic construct QL-ELE-00-006 180 bp View
NRN_DL469837 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 16396 bp unidentified QL-ELE-00-006 180 bp View
U12640.1 nt GUS gene fusion vector pBI101.3 T-D... 5352 bp Cloning vector pBI101.3 QL-ELE-00-006 180 bp View
U12640.1 nt GUS gene fusion vector pBI101.3 T-D... 5352 bp Cloning vector pBI101.3 QL-ELE-00-006 180 bp View
NRN_CS401578 nrnl1 Sequence 75 from Patent WO200601307... 3160 bp unidentified QL-ELE-00-006 180 bp View
NRN_DL469837 nrnl1 REPRODUCTIVE ABLATION CONSTRUCTS. ... 16396 bp unidentified QL-ELE-00-006 180 bp View
U12668.1 nt GUS gene fusion vector pBI101.2 T-D... 5351 bp Cloning vector pBI101.2 QL-ELE-00-006 180 bp View
NRN_GZ050961 nrnl1 Sequence 179 from patent US 8101819... 8611 bp unidentified QL-ELE-00-006 180 bp View
HQ233646.1 nt Gossypium hirsutum transgenic clone... 4644 bp Gossypium hirsutum QL-ELE-00-006 180 bp View
X84105.1 nt Artificial sequences T-DNA of binai... 5288 bp synthetic construct QL-ELE-00-006 180 bp View
JF909473.1 nt Cloning vector pPLV20, complete seq... 5797 bp Cloning vector pPLV20 QL-ELE-00-006 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.