Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC221373.1 nt Dual site Gateway binary vector pGW... 13055 bp Dual site Gateway binary vector pGWB6600-MD8-Pnos-NY2 QL-ELE-00-007 180 bp View
KX252736.1 nt Cloning vector GmScreamM10-pFLEV, c... 5168 bp Cloning vector GmScreamM10-pFLEV QL-ELE-00-007 180 bp View
GM669926.1 emblrelpat Sequence 8 from Patent WO2008077570. 6820 bp synthetic construct QL-ELE-00-007 180 bp View
KX252737.1 nt Cloning vector GmScreamM8L-pFLEV, c... 6342 bp Cloning vector GmScreamM8L-pFLEV QL-ELE-00-007 180 bp View
KX252738.1 nt Cloning vector GmScreamM8M-pFLEV, c... 4899 bp Cloning vector GmScreamM8M-pFLEV QL-ELE-00-007 180 bp View
HI578455.1 emblrelpat Sequence 71 from Patent WO2010114989. 20553 bp synthetic construct QL-ELE-00-007 180 bp View
KX252739.1 nt Cloning vector GmScreamM8S-pFLEV, c... 4693 bp Cloning vector GmScreamM8S-pFLEV QL-ELE-00-007 180 bp View
LC221374.1 nt Dual site Gateway binary vector pGW... 12731 bp Dual site Gateway binary vector pGWB6600-MD8-Pnos-CY2 QL-ELE-00-007 180 bp View
KX252740.1 nt Cloning vector GmScreamM8C-pFLEV, c... 4592 bp Cloning vector GmScreamM8C-pFLEV QL-ELE-00-007 180 bp View
LC221374.1 nt Dual site Gateway binary vector pGW... 12731 bp Dual site Gateway binary vector pGWB6600-MD8-Pnos-CY2 QL-ELE-00-007 180 bp View
LT724970.1 nt Gateway expression vector pAGRIKOLA... 9459 bp Gateway expression vector pAGRIKOLA-CATMA2a01240 QL-ELE-00-007 180 bp View
GM716039.1 emblrelpat Sequence 67 from Patent WO2008100545. 7085 bp synthetic construct QL-ELE-00-007 180 bp View
LG134662.1 emblrelpat KR 1020150134423-A/40: INFLUENZA VI... 5504 bp synthetic construct QL-ELE-00-007 180 bp View
GM716101.1 emblrelpat Sequence 129 from Patent WO2008100545. 8503 bp synthetic construct QL-ELE-00-007 180 bp View
OR569798.1 nt Cloning vector pEnEOiFusionRedMVQ-m... 5695 bp Cloning vector pEnEOiFusionRedMVQ-msfGFP QL-ELE-00-007 180 bp View
LC221375.1 nt Dual site Gateway binary vector pGW... 13152 bp Dual site Gateway binary vector pGWB6702-MD8-Pnos QL-ELE-00-007 180 bp View
OR569799.1 nt Cloning vector pEnEOimOrange2-msfGF... 5704 bp Cloning vector pEnEOimOrange2-msfGFP QL-ELE-00-007 180 bp View
LC221375.1 nt Dual site Gateway binary vector pGW... 13152 bp Dual site Gateway binary vector pGWB6702-MD8-Pnos QL-ELE-00-007 180 bp View
OR569800.1 nt Cloning vector pEnEOimRuby3-msfGFP,... 5713 bp Cloning vector pEnEOimRuby3-msfGFP QL-ELE-00-007 180 bp View
OR569801.1 nt Cloning vector pEnEOimScarlet-msfGF... 5698 bp Cloning vector pEnEOimScarlet-msfGFP QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.