Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC221345.1 nt Dual site Gateway binary vector pGW... 13402 bp Dual site Gateway binary vector pGWB6521-MD8-Pnos QL-ELE-00-007 180 bp View
LC221369.1 nt Dual site Gateway binary vector pGW... 13207 bp Dual site Gateway binary vector pGWB6655-MD8-Pnos QL-ELE-00-007 180 bp View
AB830571.1 nt Gateway vector pB5nGGW DNA, complet... 12546 bp Gateway vector pB5nGGW QL-ELE-00-007 180 bp View
LC221369.1 nt Dual site Gateway binary vector pGW... 13207 bp Dual site Gateway binary vector pGWB6655-MD8-Pnos QL-ELE-00-007 180 bp View
NRN_BD272357 nrnl1 Regulatory sequences useful for gen... 6694 bp unidentified QL-ELE-00-007 180 bp View
AB830572.1 nt Gateway vector pB5nRGW DNA, complet... 12519 bp Gateway vector pB5nRGW QL-ELE-00-007 180 bp View
HI650216.1 emblrelpat Sequence 56 from Patent WO2010121952. 9597 bp synthetic construct QL-ELE-00-007 180 bp View
AB830573.1 nt Gateway vector pB5nYGW DNA, complet... 12546 bp Gateway vector pB5nYGW QL-ELE-00-007 180 bp View
AB830573.1 nt Gateway vector pB5nYGW DNA, complet... 12546 bp Gateway vector pB5nYGW QL-ELE-00-007 180 bp View
LC221370.1 nt Dual site Gateway binary vector pGW... 13243 bp Dual site Gateway binary vector pGWB6661-MD8-Pnos QL-ELE-00-007 180 bp View
KX252716.1 nt Cloning vector CaMV35S-pFLEV, compl... 4138 bp Cloning vector CaMV35S-pFLEV QL-ELE-00-007 180 bp View
KX252717.1 nt Cloning vector GmScream1-pFLEV, com... 4921 bp Cloning vector GmScream1-pFLEV QL-ELE-00-007 180 bp View
LC221370.1 nt Dual site Gateway binary vector pGW... 13243 bp Dual site Gateway binary vector pGWB6661-MD8-Pnos QL-ELE-00-007 180 bp View
KX252718.1 nt Cloning vector GmScream2-pFLEV, com... 5084 bp Cloning vector GmScream2-pFLEV QL-ELE-00-007 180 bp View
MA622826.1 emblrelpat JP 2018138024-A/161: PLANT REGULATO... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
KX252719.1 nt Cloning vector GmScream3-pFLEV, com... 4914 bp Cloning vector GmScream3-pFLEV QL-ELE-00-007 180 bp View
KX252720.1 nt Cloning vector GmScream4-pFLEV, com... 5121 bp Cloning vector GmScream4-pFLEV QL-ELE-00-007 180 bp View
GM060229.1 emblrelpat Sequence 69 from Patent WO2008063340. 11473 bp synthetic construct QL-ELE-00-007 180 bp View
KX252721.1 nt Cloning vector GmScream5-pFLEV, com... 5376 bp Cloning vector GmScream5-pFLEV QL-ELE-00-007 180 bp View
LC221371.1 nt Dual site Gateway binary vector pGW... 13054 bp Dual site Gateway binary vector pGWB6600-MD8-Pnos-NY0 QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.