Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FZ417837.1 emblrelpat JP 2010538647-A/6: COMPOSITIONS AND... 7222 bp synthetic construct QL-ELE-00-007 180 bp View
AB489142.1 nt Plant binary vector pIG121-Hm DNA, ... 17715 bp Plant binary vector pIG121-Hm QL-ELE-00-007 180 bp View
AB830561.1 nt Gateway vector pB5cRGW DNA, complet... 12266 bp Gateway vector pB5cRGW QL-ELE-00-007 180 bp View
AB830561.1 nt Gateway vector pB5cRGW DNA, complet... 12266 bp Gateway vector pB5cRGW QL-ELE-00-007 180 bp View
LC221364.1 nt Dual site Gateway binary vector pGW... 13210 bp Dual site Gateway binary vector pGWB6624-MD8-Pnos QL-ELE-00-007 180 bp View
DJ011573.1 emblrelpat ENHANCING ACCUMULATION OF HETEROLOG... 857 bp unidentified QL-ELE-00-007 180 bp View
AB830562.1 nt Gateway vector pB5cYGW DNA, complet... 12222 bp Gateway vector pB5cYGW QL-ELE-00-007 180 bp View
AB830562.1 nt Gateway vector pB5cYGW DNA, complet... 12222 bp Gateway vector pB5cYGW QL-ELE-00-007 180 bp View
HQ687213.1 nt Virus-induced gene silencing vector... 15019 bp Virus-induced gene silencing vector pCAPE1 QL-ELE-00-007 180 bp View
LC221365.1 nt Dual site Gateway binary vector pGW... 12565 bp Dual site Gateway binary vector pGWB6627-MD8-Pnos QL-ELE-00-007 180 bp View
AB830563.1 nt Gateway vector pB5GWcCG DNA, comple... 12207 bp Gateway vector pB5GWcCG QL-ELE-00-007 180 bp View
AB830563.1 nt Gateway vector pB5GWcCG DNA, comple... 12207 bp Gateway vector pB5GWcCG QL-ELE-00-007 180 bp View
LC221365.1 nt Dual site Gateway binary vector pGW... 12565 bp Dual site Gateway binary vector pGWB6627-MD8-Pnos QL-ELE-00-007 180 bp View
DJ057708.1 emblrelpat Improved targeted DNA insertion in ... 3262 bp unidentified QL-ELE-00-007 180 bp View
AB830564.1 nt Gateway vector pB5GWcR DNA, complet... 12249 bp Gateway vector pB5GWcR QL-ELE-00-007 180 bp View
AB830564.1 nt Gateway vector pB5GWcR DNA, complet... 12249 bp Gateway vector pB5GWcR QL-ELE-00-007 180 bp View
DJ417465.1 emblrelpat High Efficiency Peptide Production ... 4136 bp unidentified QL-ELE-00-007 180 bp View
LC221366.1 nt Dual site Gateway binary vector pGW... 13249 bp Dual site Gateway binary vector pGWB6642-MD8-Pnos QL-ELE-00-007 180 bp View
AB830565.1 nt Gateway vector pB5GWcY DNA, complet... 12207 bp Gateway vector pB5GWcY QL-ELE-00-007 180 bp View
AB830565.1 nt Gateway vector pB5GWcY DNA, complet... 12207 bp Gateway vector pB5GWcY QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.