Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC221357.1 nt Dual site Gateway binary vector pGW... 12530 bp Dual site Gateway binary vector pGWB6602-MD8-Pnos QL-ELE-00-007 180 bp View
AB830551.1 nt Gateway vector pB4nRGW DNA, complet... 12201 bp Gateway vector pB4nRGW QL-ELE-00-007 180 bp View
AB830551.1 nt Gateway vector pB4nRGW DNA, complet... 12201 bp Gateway vector pB4nRGW QL-ELE-00-007 180 bp View
NRN_CS079678 nrnl1 Sequence 2 from Patent EP1528105. ... 2709 bp unidentified QL-ELE-00-007 180 bp View
BD209866.1 emblrelpat JP 2002516089-A/7: Improved methods... 10272 bp Brome mosaic virus QL-ELE-00-007 180 bp View
AB830552.1 nt Gateway vector pB4nYGW DNA, complet... 12228 bp Gateway vector pB4nYGW QL-ELE-00-007 180 bp View
AB830552.1 nt Gateway vector pB4nYGW DNA, complet... 12228 bp Gateway vector pB4nYGW QL-ELE-00-007 180 bp View
LC221358.1 nt Dual site Gateway binary vector pGW... 13240 bp Dual site Gateway binary vector pGWB6606-MD8-Pnos QL-ELE-00-007 180 bp View
LC221358.1 nt Dual site Gateway binary vector pGW... 13240 bp Dual site Gateway binary vector pGWB6606-MD8-Pnos QL-ELE-00-007 180 bp View
AB830553.1 nt Gateway vector pB4GWcCG DNA, comple... 11889 bp Gateway vector pB4GWcCG QL-ELE-00-007 180 bp View
AB830553.1 nt Gateway vector pB4GWcCG DNA, comple... 11889 bp Gateway vector pB4GWcCG QL-ELE-00-007 180 bp View
HW801714.1 emblrelpat JP 2014530006-A/4: Increasing Virus... 3447 bp synthetic construct QL-ELE-00-007 180 bp View
FW501729.1 emblrelpat ENHANCEMENT OF STRESS TOLERANCE IN ... 9833 bp synthetic construct QL-ELE-00-007 180 bp View
AB830554.1 nt Gateway vector pB4GWcR DNA, complet... 11931 bp Gateway vector pB4GWcR QL-ELE-00-007 180 bp View
LC221359.1 nt Dual site Gateway binary vector pGW... 12550 bp Dual site Gateway binary vector pGWB6609-MD8-Pnos QL-ELE-00-007 180 bp View
LC221359.1 nt Dual site Gateway binary vector pGW... 12550 bp Dual site Gateway binary vector pGWB6609-MD8-Pnos QL-ELE-00-007 180 bp View
AB830555.1 nt Gateway vector pB4GWcY DNA, complet... 11889 bp Gateway vector pB4GWcY QL-ELE-00-007 180 bp View
AB830555.1 nt Gateway vector pB4GWcY DNA, complet... 11889 bp Gateway vector pB4GWcY QL-ELE-00-007 180 bp View
HW103394.1 emblrelpat JP 2013502907-A/75: Regulatory nucl... 14019 bp synthetic construct QL-ELE-00-007 180 bp View
MA394832.1 emblrelpat JP 2018108101-A/158: PLANT REGULATO... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.