Amplicon details

Amplicon:

180 bp
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101   tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151   aaacaaaata tagcgcgcaa actaggataa  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC171797.1 nt Dual site Gateway binary vector R4p... 13896 bp Dual site Gateway binary vector R4pGWB6635-MD8 QL-ELE-00-007 180 bp View
LC171797.1 nt Dual site Gateway binary vector R4p... 13896 bp Dual site Gateway binary vector R4pGWB6635-MD8 QL-ELE-00-007 180 bp View
LC221339.1 nt Dual site Gateway binary vector pGW... 12995 bp Dual site Gateway binary vector pGWB6502-MD8-Pnos QL-ELE-00-007 180 bp View
LC221339.1 nt Dual site Gateway binary vector pGW... 12995 bp Dual site Gateway binary vector pGWB6502-MD8-Pnos QL-ELE-00-007 180 bp View
LC171798.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6640-MD8 QL-ELE-00-007 180 bp View
LC171798.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6640-MD8 QL-ELE-00-007 180 bp View
GZ549057.1 emblrelpat Sequence 5 from patent US 8298819. 13026 bp unidentified QL-ELE-00-007 180 bp View
DL469840.1 emblrelpat REPRODUCTIVE ABLATION CONSTRUCTS. 10312 bp synthetic construct QL-ELE-00-007 180 bp View
LC171799.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6643-MD8 QL-ELE-00-007 180 bp View
LC171799.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6643-MD8 QL-ELE-00-007 180 bp View
LG027303.1 emblrelpat KR 1020150018568-A/21: Method for P... 12295 bp synthetic construct QL-ELE-00-007 180 bp View
LC221340.1 nt Dual site Gateway binary vector pGW... 13705 bp Dual site Gateway binary vector pGWB6506-MD8-Pnos QL-ELE-00-007 180 bp View
GZ549058.1 emblrelpat Sequence 6 from patent US 8298819. 27875 bp unidentified QL-ELE-00-007 180 bp View
LC171800.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6650-MD8 QL-ELE-00-007 180 bp View
LC171800.1 nt Dual site Gateway binary vector R4p... 12960 bp Dual site Gateway binary vector R4pGWB6650-MD8 QL-ELE-00-007 180 bp View
MA057173.1 emblrelpat JP 2018023385-A/209: PLANT REGULATO... 253 bp Agrobacterium tumefaciens QL-ELE-00-007 180 bp View
LC171801.1 nt Dual site Gateway binary vector R4p... 12921 bp Dual site Gateway binary vector R4pGWB6653-MD8 QL-ELE-00-007 180 bp View
LC171801.1 nt Dual site Gateway binary vector R4p... 12921 bp Dual site Gateway binary vector R4pGWB6653-MD8 QL-ELE-00-007 180 bp View
LC221341.1 nt Dual site Gateway binary vector pGW... 13015 bp Dual site Gateway binary vector pGWB6509-MD8-Pnos QL-ELE-00-007 180 bp View
LC221341.1 nt Dual site Gateway binary vector pGW... 13015 bp Dual site Gateway binary vector pGWB6509-MD8-Pnos QL-ELE-00-007 180 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.